Hmm, My XDS-Viewer.app installation is not in a standard place, more likely you need:
cd /usr/local/bin ln -s /Applications/XDS-Viewer.app/Contents/MacOS/xds-viewer-bin . Cheers, Miguel Ortiz Lombardía Architecture et Fonction des Macromolécules Biologiques (UMR7257) CNRS, Aix-Marseille Université Case 932, 163 Avenue de Luminy, 13288 Marseille cedex 9, France Tel: +33(0) 491 82 86 44 Fax: +33(0) 491 26 67 20 mailto:miguel.ortiz-lombar...@afmb.univ-mrs.fr http://www.afmb.univ-mrs.fr/Miguel-Ortiz-Lombardia Le 26/06/13 17:08, Miguel Ortiz Lombardía a écrit : > Hi Sebastiano, > > Yes, you have to put the xds-viewer executable in your PATH. In the Mac > and assuming /usr/local/bin is in your PATH: > > cd /usr/local/bin > ln -s > /Applications/Sci/Struct/XDS-Viewer.app/Contents/MacOS/xds-viewer-bin . > > Cheers, > > Miguel Ortiz Lombardía > > Architecture et Fonction des Macromolécules Biologiques (UMR7257) > CNRS, Aix-Marseille Université > Case 932, 163 Avenue de Luminy, 13288 Marseille cedex 9, France > Tel: +33(0) 491 82 86 44 > Fax: +33(0) 491 26 67 20 > mailto:miguel.ortiz-lombar...@afmb.univ-mrs.fr > http://www.afmb.univ-mrs.fr/Miguel-Ortiz-Lombardia > > Le 26/06/13 16:50, Sebastiano Pasqualato a écrit : >> >> Hi Kay, hi all, >> >> sorry to bother again, but I was wondering if people is experiencing the >> same problem I am. >> >> With the nice new XDS graphical interface, I cannot manage to have the >> "show frame with predicted spots" script to work. >> >> It looks like all the steps are performed correctly, but then XDS-viewer >> does not display the frame (here you can see what >> happens: >> https://dl.dropboxusercontent.com/u/4914553/Screen%20Shot%202013-06-26%20at%204.44.40%20PM.png). >> >> Is anybody else experiencing this? >> Any hint on how to make XDS-viewer to work in this case? >> >> Thanks in advance, >> Sebastiano >> >> >> >> On Jun 15, 2013, at 9:49 AM, Kay Diederichs >> <kay.diederi...@uni-konstanz.de <mailto:kay.diederi...@uni-konstanz.de>> >> wrote: >> >>> Hi everybody, >>> >>> I developed a GUI for academic users of XDS which is documented at >>> http://strucbio.biologie.uni-konstanz.de/xdswiki/index.php/XDSgui . >>> This XDSwiki article also has the links to binaries of xdsGUI (or >>> XDSgui or xds-gui; this has not been decided yet ...), for Linux 32 >>> and 64 bit (compiled on a RHEL 6 clone), and Mac OS X (compiled on 10.7). >>> The 'added value' of the GUI is that it produces informative plots >>> which should greatly help to make decisions in data processing. >>> The GUI is simple, tries to be self-explanatory and should be >>> straightforward to operate. Noteworthy may be the TOOLS tab which >>> offers a means to run commandline scripts upon a click with the mouse. >>> This tab accepts user modifications which should make it attractive >>> also for expert users - they can run their own scripts. >>> This is the first version made publicly available. There are probaby >>> bugs and I would like to learn about these. In particular, Mac experts >>> please tell me how to solve the problems explained at the bottom of >>> the Wiki article ... >>> >>> thanks, >>> >>> Kay >>> -- >>> Kay Diederichs >>> http://strucbio.biologie.uni-konstanz.de >>> email: kay.diederi...@uni-konstanz.de >>> <mailto:kay.diederi...@uni-konstanz.de> Tel +49 7531 88 4049 Fax 3183 >>> Fachbereich Biologie, Universität Konstanz, Box 647, D-78457 Konstanz >> >> -- >> *Sebastiano Pasqualato, PhD* >> Crystallography Unit >> Department of Experimental Oncology >> European Institute of Oncology >> IFOM-IEO Campus >> via Adamello, 16 >> 20139 - Milano >> Italy >> >> tel +39 02 9437 5167 >> fax +39 02 9437 5990 >> >> >> >> >> >>
