Tim,

naturally, the issue is specific to a particular pdb file (it would be
indeed strange if the conversion tool from a major software package
would fail in general sense).

Ed.

On Wed, 2013-05-22 at 08:12 +0200, Tim Gruene wrote:
> Hi Ed,
> 
> 
> #> pdbvconv -p udo.pdb -o udov.pdb
> #> pdbvconv -p udov.pdb -o udovv.pdb
> #> diff -q udo.pdb udov.pdb
> Files udo.pdb and udov.pdb differ
> #> diff -q udov.pdb udovv.pdb
> Files udov.pdb and udovv.pdb differ
> #> diff -q udo.pdb udovv.pdb
> #>
> 
> it works for me, Version: 1.0 (11 June 2008) from buster 2.10. Which
> version of pdbvconv are you using?
> Best,
> Tim
> 
> 
> On 05/21/2013 10:40 PM, Ed Pozharski wrote:
> > On 05/21/2013 04:35 PM, Francis Reyes wrote:
> >> Since you're using buster, have you tried global phasing's own 
> >> pdbvconv tool?
> > Naturally, but it leaves file unchanged.
> > 
> 

-- 
Edwin Pozharski, PhD, Assistant Professor
University of Maryland, Baltimore
----------------------------------------------
When the Way is forgotten duty and justice appear;
Then knowledge and wisdom are born along with hypocrisy.
When harmonious relationships dissolve then respect and devotion arise;
When a nation falls to chaos then loyalty and patriotism are born.
------------------------------   / Lao Tse /

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