Dear All: I try to add water to my model.
Here is how I did: Coot: Find Wates Map: FWT PHWT; 1.8 rmsd; Distances to protein atoms: 2.4 min/3.2 max Coot found 270 water molecules. I then examed these waters. Most of them had ball shape. Some had two or more balls together. Some had irregular shape (not glabol shape). I run Water Check. The program did not find any mis-matched water. Here is my question: how could I tell the waters are real? Or something else? Thank you for advice Ros