GOt it! Thanks!
Best REgards, Hailiang > Hi Hailiang > > sftools was first and foremost designed to be used interactively, that > is why it tends to follow a question and answer user interface. Of > course you can use sftools in scripts but if it pops up a question that > was not anticipated, the script it will crash. There could be a batch > mode where you give sftools permission to make a best guess but guessing > can be dangerous. > > In your particular case, XPLOR uses a flag=1 for rfree reflections and 0 > for working set reflections while CCP4 MTZ by default uses a flag=0 for > rfree reflections and non-zero for working set reflections. If sftools > encounters an mtz that appears to use the XPLOR definition it gives a > warning and suggests to convert to the CCP4 definition. > > For proper MTZ files this should not happen and if it does happen maybe > you should find out why. > > Bart > > On 10-09-02 02:00 PM, Hailiang Zhang wrote: >> Hi, >> >> I am reading a ccp4 mtz file using SFTOOLS. It asked me" Is this an >> XPLOR >> RFREE flag column?". First I assume the answer is NO, since the input is >> a >> CCP4 mtz file although the colume is for free-flags. Then, I am >> wondering >> what is the script to automatically answer "NO" in a shell script. >> >> Thanks! >> >> Best Regards, Hailiang >> >> > > -- > > ============================================================================ > > Bart Hazes (Associate Professor) > Dept. of Medical Microbiology& Immunology > University of Alberta > 1-15 Medical Sciences Building > Edmonton, Alberta > Canada, T6G 2H7 > phone: 1-780-492-0042 > fax: 1-780-492-7521 > > ============================================================================ > > >
