I mean the density of 2mFo-DFc or Fc maps.
> On Wednesday 25 August 2010 03:13:53 pm Hailiang Zhang wrote: >> Hi Garib: >> >> Actually I tried coot real space refine zone, but the model seems not >> sliding into the best density map (I also tried dragging it around, but >> still not working fine). Then I found some comments saying minimizing >> the >> difference between 2mFo-DFc and Fc may be better, thats why I am asking >> for this. > > Wait a minute. If you are minimizing a residual based on differences > between Fo and Fc (never mind the precise coefficients), how is this > "real space refinement"? > > (puzzled) Ethan > > >> >> Best Regards, Hailiang >> >> > Why you do not use coot? It does exactly what you want. >> > >> > regards >> > Garib >> > >> > On 25 Aug 2010, at 22:33, Hailiang Zhang wrote: >> > >> >> Hi, >> >> >> >> Can some utilities of CCP4 do the real-space refinement locally >> >> with the >> >> residue range explicitly specified? >> >> >> >> By the way, I have registered phenix bb. Just didn't realize this >> >> before, >> >> sorry again. >> >> >> >> Best Regards, Hailiang >> > >> > >> > > -- > Ethan A Merritt > Biomolecular Structure Center, K-428 Health Sciences Bldg > University of Washington, Seattle 98195-7742 > >
