Can you check your input file. It may contain contain link record already

regards
Garib

On 1 Feb 2010, at 13:52, Jan Dohnalek wrote:

Dear all
I understand that when I use the Refmac keyword
make link no
Refmac should not apply found links.
It keeps finding links between ligands (Na+ and ligand OH) and (I think) refines them as it issues a warning (not INFO), does not say "(not be used)" for these and the output .pdb file contains the LINK records newly created for these atoms.

The actual distances look pretty much as if they were restrained ...

Is there a way to make Refmac ignore these links?

Jan Dohnalek

--
Jan Dohnalek, Ph.D
Institute of Macromolecular Chemistry
Academy of Sciences of the Czech Republic
Heyrovskeho nam. 2
16206 Praha 6
Czech Republic

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