Dear all I understand that when I use the Refmac keyword make link no Refmac should not apply found links. It keeps finding links between ligands (Na+ and ligand OH) and (I think) refines them as it issues a warning (not INFO), does not say "(not be used)" for these and the output .pdb file contains the LINK records newly created for these atoms.
The actual distances look pretty much as if they were restrained ... Is there a way to make Refmac ignore these links? Jan Dohnalek -- Jan Dohnalek, Ph.D Institute of Macromolecular Chemistry Academy of Sciences of the Czech Republic Heyrovskeho nam. 2 16206 Praha 6 Czech Republic Tel: +420 296 809 390 Fax: +420 296 809 410
