Dear Askok,
There is many programs & online servers to do this task,
i prefer you profit server, 
http://www.bioinf.org.uk/profit/ 
 
best regards
jaimohan
 
 

--- On Sat, 24/10/09, ashok kumar <ashokb...@gmail.com> wrote:


From: ashok kumar <ashokb...@gmail.com>
Subject: [ccp4bb]
To: CCP4BB@JISCMAIL.AC.UK
Date: Saturday, 24 October, 2009, 6:07 PM



Dear all
 
i want to know is there any programme to calculate the r.m.s deviation 
of a some segment while superimposing the whole molecule together.
 
 
Thanks in advance for any suggestion

Ashok 


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