Dear Zhongren,
if I remember correctly, mapman from G. Kleywegt can convert from CCP4 map
format to various other formats, including CNS.
Tim
--
Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
On Thu, 28 May 2009, Wu, Zhongren wrote:
Dear Paul:
Thank you for your input.
Maps generated by CCP4 are CNS-formatted and they are not accepted with
Discovery Studio (DS) and Maestro. DS and Maestro use only CNX-generated
maps.
I did try xdlmapman. No luck. However, I am not sure if xdlmapman is
able to convert maps to CNX-formatted ones.
Regards,
Zhongren
________________________________________________________________________________
From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf Of
Paul Mcewan
Sent: Thursday, May 28, 2009 4:30 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] CCP4 compatability with other software suites
xdlmapman does lots of map conversions. You could try one of the options
there.
Best,
Paul..
###################################
Dr. Paul A. McEwan
Office B55
Centre for Biomolecular Science
University of Nottingham
Nottingham
NG7 2RD
UK
Tel: 0115 8232010 (office)
Tel: 0115 8232011 (lab)
http://www.nottingham.ac.uk/pharmacy/research/medicinal-chemistry-structural-bio
logy/structbio.php
###################################
________________________________________________________________________________
From: CCP4 bulletin board on behalf of Wu, Zhongren
Sent: Thu 28/05/2009 3:16 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] CCP4 compatability with other software suites
Hi, All:
Our structural biology group is using routinely CCP4, Discovery studio
Accelrys), Maestro (Schrodinger) and CNX (Accelrys) for our data
refinements. However, density maps generated by CCP4 are not readable
by Discovery Studio or Maestro.
We have found that Quanta is able to read CCP4 maps. We also find that
CNX-generated maps can be read by both Discovery Studio and Maestro.
Does CCP4 have a program that makes its density maps readable by others?
Thanks.
Zhongren Wu
Vitae Pharmaceuticals, Inc
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