Dear Andy,
This is not exactly an answer to your question, but depending on the
exact result you want from ALSCRIPT you might consider trying out our
GUI-based program ALINE:
http://crystal.bcs.uwa.edu.au/px/charlie/software/aline/
Bond, C.S. and Schüttelkopf, A.W. (2009), "An Extensible WYSIWYG Protein
Sequence Alignment Editor for Publication Quality Figures", Acta cryst.
D65, 510-512
Cheers,
Charlie
Andy Torelli wrote:
To the CCP4bb,
I have an off-topic request regarding Alscript, a program used to
make postscript images from sequence alignments. Does anyone have an
Alscript script file (.als) that successfully implements the
"RELATIVE_TO" and "mask ILLEGAL" commands that I could look at? I
haven't been able to get these commands to work and I haven't found a
fix from the documentation, CCP4wiki or Google searches.
I would be grateful to anyone with an example script using these
commands they could share. If so, please spare the bulletin board and
respond to me directly.
Best Regards,
-Andy Torelli
===========================================
Andrew T. Torelli Ph.D.
Postdoctoral Associate
Department of Chemistry & Chemical Biology
Baker Laboratory, Cornell University
Ithaca, NY 14853
===========================================
--
Charlie Bond
Professorial Fellow
University of Western Australia
School of Biomedical, Biomolecular and Chemical Sciences
M310
35 Stirling Highway
Crawley WA 6009
Australia
charles.b...@uwa.edu.au
+61 8 6488 4406
