Within PyMOL:

remove polymer and not name N+CA+C+O+CB
alter polymer, resn="ALA"
save polyALA.pdb

Cheers,
Warren

--
From: CCP4 bulletin board [mailto:[EMAIL PROTECTED] On Behalf Of
Bottomley, Matthew
Sent: Thursday, May 29, 2008 5:35 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: [ccp4bb] Making a Poly ala model

Dear All, 
Can anyone recommend a windows/PC-friendly program (website?) to convert
a PDB file into a poly-Ala model? 
Thanks a lot! 
Matt 
==================================== 
Matthew J. Bottomley, Ph.D. 
Senior Research Biochemist 
IRBM / MRL-Rome 
==================================== 
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