On Tuesday 01 January 2008 06:40, Mark A Saper wrote:
> 
> Well, I guess one shouldn't change versions of refmac in the middle  
> of a structure refinement.  What are the major differences between . 
> 0034 and .0066 ?  I noted that form factors for the Se atom have  
> changed dramatically even though I'm using the same " anom formfactor  
> SE -8.13 5.05 " command.  Is this because the program is now using  
> the wavelength on the .MTZ file ?
> 
> with .0034:
> 
>   SE     8.8706   2.4098   5.8196   0.2726   3.9731  15.2372    
> 4.3543  43.8163   2.8409

The first coefficient here is wrong.

> with .0066:
> 
>   SE    17.0006   2.4098   5.8196   0.2726   3.9731  15.2372    
> 4.3543  43.8163 -11.7969

These are the values given for a1, b1, ... a4, b4 in Table 6.1.1.4
of International Tables for Crystallography Volume C (1995).

The value of c (-11.7969) corresponds to an f' value of 
-14.6378  (=  -11.7969 - 2.8409)

This could only be possible at the inflection point of the Se
anomalous scattering curve, and only for a beam with a very narrow
bandwidth.   Current generation beamlines more typically yield an
effective f' of -5e to -10e in practice.

-- 
Ethan A Merritt            Courier Deliveries: 1959 NE Pacific
Dept of Biochemistry
Health Sciences Building
University of Washington - Seattle WA 98195-7742

Reply via email to