Hi Sreeram,
Ironically IISc Bangalore, your host institute has the server that
exactly does what you want and more!
The paper has just been published in the Nucleic Acid Research.
Tina KG, Bhadra R, Srinivasan N.
PIC: Protein Interactions Calculator.
Nucleic Acids Res. 2007 Jul 1;35(Web Server issue):W473-6. Epub 2007
Jun 21.
PMID: 17584791 [PubMed - in process]
The server can be accessed @ http://crick.mbu.iisc.ernet.in/~PIC
Good luck!
Anthony
________________________________
Anthony Addlagatta, PhD
Institute of Molecular Biology
University of Oregon
Eugene, OR-97403
Phone: (541) 346-5867
Fax: (541)346-5870
Web: http://uoregon.edu/~anthony
On Aug 2, 2007, at 9:48 AM, Sreeram Mahesh wrote:
Hi All!
I have found stacking interaction between aromatic residues of a
structure of an enzyme. does anybody knows any server which can
quantify the stacking interaction between side chains of aminoacids.
Thanking very much in advance!
Sreeram Mahesh
Research Student
Prof S Ramakumar's lab
PHYSICS department
IISc Bangalore-560 012.
ph:080-2293 2718.
mobile: 9241145183.
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