Andreas Tille pushed to branch master at Debian Blends Team / med
Commits:
d2475f21 by Andreas Tille at 2020-06-03T15:51:45+02:00
Add bbhash, update packages
- - - - -
2 changed files:
- covid-19_doc/bio_covid-19_dependencies_query
- covid-19_doc/bio_covid-19_dependencies_result
Changes:
=====================================
covid-19_doc/bio_covid-19_dependencies_query
=====================================
@@ -75,6 +75,7 @@ INSERT INTO covid19_packages VALUES
('r-other-ascat'),
('augustus'),
('bandage'),
+('libbbhash-dev'),
('bcftools'),
('bedtools'),
('python3-biopython'),
=====================================
covid-19_doc/bio_covid-19_dependencies_result
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Mon, 01 Jun 2020 15:53:51 +0200
+Last-Update: Wed, 03 Jun 2020 14:13:24 +0200
package | architectures | section |
releases | conda | bio.tools |
testsuite
---------------------+---------------------+----------+-----------------------------------------------+----------------------+--------------+-------------------------------------
@@ -24,14 +24,15 @@ Last-Update: Mon, 01 Jun 2020 15:53:51 +0200
fastp | amd64,arm64,ppc64el | main | buster,bullseye,sid
| fastp | | autopkgtest
fastqc | all | main | buster,bullseye,sid
| fastqc | FastQC | autopkgtest
filtlong | amd64,arm64,ppc64el | main | bullseye,sid
| filtlong | | autopkgtest
- flash | amd64,arm64,ppc64el | main | sid
| flash | |
- freebayes | amd64,arm64,ppc64el | main | buster,bullseye,sid
| freebayes | freebayes |
+ flash | amd64,arm64,ppc64el | main | bullseye,sid
| flash | |
+ freebayes | amd64,arm64,ppc64el | main | buster,bullseye,sid
| freebayes | freebayes | autopkgtest
gatk | | |
https://salsa.debian.org/med-team/gatk | gatk4 |
|
graphmap2 | | |
https://salsa.debian.org/med-team/graphmap2 | graphmap |
|
ivar | amd64,arm64 | main | bullseye,sid
| ivar | |
kallisto | amd64,arm64,ppc64el | main | bullseye,sid
| kallisto | kallisto | autopkgtest
kmc | amd64,arm64,ppc64el | main | buster,bullseye,sid
| kmc | KMC | autopkgtest
kraken2 | amd64,arm64,ppc64el | main | bullseye,sid
| kraken2 | kraken | autopkgtest
+ libbbhash-dev | | |
| | |
libhts-dev | amd64,arm64,ppc64el | main | buster,bullseye,sid
| htslib | | autopkgtest
lighter | | | new
| lighter | |
lumpy-sv | | |
https://salsa.debian.org/med-team/lumpy-sv | lumpy-sv |
|
@@ -100,5 +101,5 @@ Last-Update: Mon, 01 Jun 2020 15:53:51 +0200
velvet | amd64,arm64,ppc64el | main | buster,bullseye,sid
| velvet | velvet | autopkgtest
vg | amd64 | main | bullseye,sid
| vg | | autopkgtest
vsearch | amd64,ppc64el | main | buster,bullseye,sid
| vsearch | vsearch |
-(98 Zeilen)
+(99 Zeilen)
View it on GitLab:
https://salsa.debian.org/blends-team/med/-/commit/d2475f21a266af44ea20c0da139aefeeb9fd1b30
--
View it on GitLab:
https://salsa.debian.org/blends-team/med/-/commit/d2475f21a266af44ea20c0da139aefeeb9fd1b30
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