Hello, I received an error today on this machine for ALDEx2
I last committed 12 days ago and until today it was building cleanly on everything. I am not sure what I can do to fix the error since I don't know what dependency is calling that library file Any help appreciated Greg ############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data ALDEx2 ### ############################################################################## ############################################################################## * checking for file ‘ALDEx2/DESCRIPTION’ ... OK * preparing ‘ALDEx2’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘ALDEx2_vignette.Rmd’ using rmarkdown --- finished re-building ‘ALDEx2_vignette.Rmd’ --- re-building ‘scaleSim_vignette.Rmd’ using rmarkdown Quitting from lines 331-419 [graph] (scaleSim_vignette.Rmd) Error: processing vignette 'scaleSim_vignette.Rmd' failed with diagnostics: unable to load shared object '/home/biocbuild/bbs-3.18-bioc/R/site-library/sf/libs/sf.so': libgdal.so.30: cannot open shared object file: No such file or directory --- failed re-building ‘scaleSim_vignette.Rmd’ SUMMARY: processing the following file failed: ‘scaleSim_vignette.Rmd’ Error: Vignette re-building failed. Execution halted _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
