Have you checked

http://contributions.bioconductor.org/git-version-control.html#faq


specifically points: 13-16






Lori Shepherd - Kern

Bioconductor Core Team

Roswell Park Comprehensive Cancer Center

Department of Biostatistics & Bioinformatics

Elm & Carlton Streets

Buffalo, New York 14263

________________________________
From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Dirk Moore 
<dirkfmo...@gmail.com>
Sent: Thursday, September 7, 2023 12:15 PM
To: bioc-devel@r-project.org <bioc-devel@r-project.org>
Subject: [Bioc-devel] Unable to push updated development package to Bioconductor

I am developing a package called �protlocassign� and trying to get it ready
for Bioconductor. In the past, I was able to simply type �git push upstream
main:devel� and within a few minutes the Bioconductor server had compiled
the package and posted the build report with notes, warnings, etc.

Now, however, this doesn�t work for me. In response to �git push upstream
main:devel� I get the message �g...@git.bioconductor.org: Permission denied
(publickey). fatal: Could not read from remote repository. Please make sure
you have the correct access rights and the repository exists.�

When I brought this to the attention of a Bioconductor admin, that person
recommended that I update my public and private SSH keys. I have done this,
and all is fine with pushing revisions to my GitHub account. I have, of
course, incremented the version number for my package. But still, I receive
the same �Permission denied (publickey). fatal� error message.

Any suggestions on how to fix this?

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