Recursion issue. Make sure some constructor isn’t constructing itself into
oblivion. This is a nasty one
--t
> On Nov 27, 2021, at 5:48 AM, Zhou, Wanding
> <wanding.z...@pennmedicine.upenn.edu> wrote:
>
> Hi,
> Recently we are experience some memory issue on both development and release
> (mostly Windows) that causes the sesame package build to fail. We are trying
> to address it but it seems to run fine locally on our side.
>
> This is the error on the development branch
>
> Setting options('download.file.method.GEOquery'='auto')
> Setting options('GEOquery.inmemory.gpl'=FALSE)
> Error: processing vignette 'sesame.Rmd' failed with diagnostics:
> C stack usage 7977908 is too close to the limit
>
> And this is the error on the release branch
>
>
>> data = data.frame(estimate=c(runif(10, 0, 10)))
>> plotLollipop(data)
> Error in grid.newpage() :
> 'Calloc' could not allocate memory (27541715 of 1 bytes)
> Calls: <Anonymous> -> print.ggplot -> grid.newpage
>
> Let me know if you are aware of something or have a clue. Any insight will be
> super helpful!
>
> Thanks!
>
>
> Zoom link: https://us02web.zoom.us/j/4248839577
>
> ----
> Wanding Zhou, Ph.D.
> Assistant Professor
>
> Office: CTRB 9050
> 3501 Civic Center Blvd
> Philadelphia, PA 19104
> Lab: https://zhou-lab.github.io/
> Phone (o): (215) 590-0473
>
> [[alternative HTML version deleted]]
>
> _______________________________________________
> Bioc-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/bioc-devel
_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel
