Sorry, my bad, I actually changed the code but for it work properly it is
mandatory to rebuild the package completely (not only loading it through
devtools). It seems to work for 1 function, I'll change the option export
global in all the code and rebuild it and see if it works. Do you know if it is
necessary also for MulticoreParam? It doesn't seem to be necessary and when I
previously set the option to TRUE I always got warning messages for the stats
package, that’s way we set it to FALSE.
Thank you so much for your help
On 10/25/21, 13:58, "Jiefei Wang" <szwj...@gmail.com> wrote:
I do not see it from the build report here:
http://bioconductor.org/checkResults/devel/bioc-LATEST/ISAnalytics/riesling1-checksrc.html
Can you please provide a reproducible example? It can be very helpful
to locate the issue
On Mon, Oct 25, 2021 at 7:53 PM Giulia Pais <giuliapa...@gmail.com> wrote:
>
> I mean that trying to modify the code of one of the functions that raises
errors and setting the option "exportglobals = TRUE" on SnowParam, somehow it
still fails and says it doesn't find the function "mandatory_is_vars()" which
is a function exported by the package
>
> On 10/25/21, 13:49, "Jiefei Wang" <szwj...@gmail.com> wrote:
>
> What do you mean by "exported functions are invisible to SnowParam
> workers"? Please provide more details. If you call 'bplapply' with a
> function from your package, it should be visible to the worker.
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