Hello,
I am trying to align two sequences, in DNAString format using the R command
pairwiseAlignment.
I keep getting this error:
pairwiseAlignment(si,sj)
Error in .Call2("XStringSet_align_pairwiseAlignment", pattern, subject, :
max(nchar(pattern) * nchar(subject)) is too big (must be <= 2147483647)
The 2 DNAstrings are si and sj, and are 108,007 bp and 120,698 bp long,
respectively.
Can someone help me? Are the sequences too long perchance?
Thanks, Matthew
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