Thanks Nitesh! It looks like this worked, now we just need to squash the R CMD Check issues that arose in the meantime :-)
Much obliged, Timothy J. Triche, Jr., PhD Assistant Professor of Bioinformatics, Van Andel Institute 330 Bostwick Avenue NE, Grand Rapids, MI, 49503 (616) 234-5316 (office) (626) 375-9663 (mobile) (616) 234-5252 (administrative, courtesy of Lauren Dunkelberg) https://trichelab.vai.org/ ________________________________________ From: Nitesh Turaga <nturaga.b...@gmail.com> Sent: Monday, April 5, 2021 12:10 PM To: Triche, Tim; bioc-devel@r-project.org Cc: Harmon, Lauren Subject: [External] Re: [Bioc-devel] BFG cleanup on `spiky` repo (under submission) Hi Tim, This package should be fixed now. I've synced your github repo with the one on git.bioconductor.org. Please check to make sure everything is as expected including the size. Best, Nitesh On 4/1/21, 6:22 AM, "Bioc-devel on behalf of Triche, Tim" <bioc-devel-boun...@r-project.org on behalf of tim.tri...@vai.org> wrote: Hi all, We had a couple of chr22 BAMs in this package that kept sneaking in, so I nuked them with the BFG and would like to request a reset (force pull) upstream into the BioC git server repo (g...@git.bioconductor.org:packages/spiky). This should allow for us to proceed with committing the various bugfixes and changes that have occurred downstream of BioC (about 46 last time I checked) and make sure we have cleaned up everything on the spb. I nuked everything larger than 10M (realistically I could have whacked everything larger than 3M but 10M was sufficient to catch the BAMs). Thanks! Timothy J. Triche, Jr., PhD Assistant Professor of Bioinformatics, Van Andel Institute 330 Bostwick Avenue NE, Grand Rapids, MI, 49503 (616) 234-5316 (office) (626) 375-9663 (mobile) (616) 234-5252 (administrative, courtesy of Lauren Dunkelberg) https://trichelab.vai.org/ _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel CAUTION: This email was sent from outside of the organization (nturaga.b...@gmail.com). Do not click links or open attachments unless you recognize the sender and know the content is safe. If you have any questions, please contact serviced...@vai.org <mailto:serviced...@vai.org>. _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
