DifferentialDNA3DStructure has been added to the devel list of biocViews terms and will be carried through in future releases. It will be available once biocViews version 1.59.3 propagates on the build system
Cheers, Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Tim Triche, Jr. <tim.tri...@gmail.com> Sent: Saturday, April 3, 2021 10:07 PM To: Matthias Zytnicki <matthias.zytni...@inrae.fr> Cc: bioc-devel@r-project.org <bioc-devel@r-project.org> Subject: Re: [Bioc-devel] Adding new "DifferentialDNA3DStructure" to biocViews Seconded HiC isn’t even very good at this 😁 --t > On Apr 3, 2021, at 7:05 AM, Matthias Zytnicki <matthias.zytni...@inrae.fr> > wrote: > > Dear everyone, > > > First please accept my apologies if my request is not appropriate here. > > If so, please suggest me how to proceed. > > > I would like to suggest adding a new item in the biocViews: > > === > > BiologicalQuestion -> DifferentialDNA3DStructure; > > === > > The rationale is: > > * There are already several biocViews starting with "Differential": > DifferentialExpression, DifferentialMethylation, DifferentialPeakCalling, > DifferentialSplicing. > * The biocViews "DNA3DStructure" already exists. > * I can spot at least 4 bioC package that would fit in this biocViews: > diffHic, HiCcompare, multiHiCcompare, TADCompare, plus the ones I am not > aware of (and I obviously would like to add one in a near future). > * I expect several new packages in the fields: differential interactions, > differential loops, differential TADs, etc. > > The new biocView could be "DifferentialHiC", but I find it a bit too > restrictive. > > Best regards, > > Matthias. > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://secure-web.cisco.com/1rLuvqB0nxpnJLzJEOHGw6iM8Fd23KOIr-ZWCrORWixft-fszdowb08lvVRi4tQFIYc0yCePxssIqUUjRBj3y0d_RP21yEBvuhH9jevqlWYUB7WKEVGqyQ1cDsHUWVI_wotA7ffJ_JgAw_u16IAt-_B2WzUk3zARrsq_McJiSNyjgHAkXOx8V9PkqlFrZUUMChWo-SM98VHQLB4eXuXWJUIe7SJn4ZMh7QJkq3-2iumifj_KyB8Bh3rN4VZF1I0JSnKfBYY_I2CBeBVKcoLOeCI5TkRpRHVjEsQ21CvZP4cMnVEGyBJMV844sGdF7gmmz/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel _______________________________________________ Bioc-devel@r-project.org mailing list https://secure-web.cisco.com/1rLuvqB0nxpnJLzJEOHGw6iM8Fd23KOIr-ZWCrORWixft-fszdowb08lvVRi4tQFIYc0yCePxssIqUUjRBj3y0d_RP21yEBvuhH9jevqlWYUB7WKEVGqyQ1cDsHUWVI_wotA7ffJ_JgAw_u16IAt-_B2WzUk3zARrsq_McJiSNyjgHAkXOx8V9PkqlFrZUUMChWo-SM98VHQLB4eXuXWJUIe7SJn4ZMh7QJkq3-2iumifj_KyB8Bh3rN4VZF1I0JSnKfBYY_I2CBeBVKcoLOeCI5TkRpRHVjEsQ21CvZP4cMnVEGyBJMV844sGdF7gmmz/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
