Dear Sir,
Please inform me the current status of the package named "sigFeature". The package link is given below. https://github.com/Bioconductor/Contributions/issues/713 Thank you regards Pijush On Fri, Apr 27, 2018 at 7:00 PM, Pijush Das <topij...@gmail.com> wrote: > > Now it is opening. It may be some kind of problem is there with the > internet connection. > > > > > On Fri, Apr 27, 2018 at 6:56 PM, Shepherd, Lori < > lori.sheph...@roswellpark.org> wrote: > >> I am still able to open the link: >> >> https://github.com/Bioconductor/Contributions/issues/713 >> >> >> Perhaps there is some firewall or ani-virus program you are running that >> is blocking access? >> >> >> When you try to go to the link, what message is displayed? >> >> >> Lori Shepherd >> >> Bioconductor Core Team >> >> Roswell Park Cancer Institute >> >> Department of Biostatistics & Bioinformatics >> >> Elm & Carlton Streets >> >> Buffalo, New York 14263 >> ------------------------------ >> *From:* Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of >> Shepherd, Lori <lori.sheph...@roswellpark.org> >> *Sent:* Friday, April 27, 2018 8:18:23 AM >> *To:* Pijush Das; Morgan, Martin >> *Cc:* bioc-devel@r-project.org >> *Subject:* Re: [Bioc-devel] Need some help to submit a R package. >> >> I am able to open this link. Perhaps it was an intermittent internet >> connection issue? Are you able to open the link now? >> >> >> Lori Shepherd >> >> Bioconductor Core Team >> >> Roswell Park Cancer Institute >> >> Department of Biostatistics & Bioinformatics >> >> Elm & Carlton Streets >> >> Buffalo, New York 14263 >> >> ________________________________ >> From: Pijush Das <topij...@gmail.com> >> Sent: Friday, April 27, 2018 7:06:07 AM >> To: Morgan, Martin >> Cc: Shepherd, Lori; bioc-devel@r-project.org >> Subject: Re: [Bioc-devel] Need some help to submit a R package. >> >> Dear Sir, >> >> >> I have found some problem in github link given below: >> https://github.com/Bioconductor/Contributions/issues/713 >> The link is not opening. Is there any problem in github repository? >> Please check it. >> >> >> Thank you >> >> >> regards >> Pijush >> >> >> >> >> >> >> >> On Thu, Apr 26, 2018 at 2:32 PM, Martin Morgan < >> martin.mor...@roswellpark.org<mailto:martin.mor...@roswellpark.org>> >> wrote: >> Wait for the reviewer to comment further on your package. >> >> On 04/26/2018 02:20 AM, Pijush Das wrote: >> Dear Sir, >> >> >> I have found that my package sigFeature had passed all the built test >> without errors or warnings >> on all platforms. >> What should I do next ? >> >> >> >> >> >> regards >> Pijush >> >> >> >> >> >> >> >> >> >> >> >> >> On Tue, Apr 24, 2018 at 10:56 PM, Shepherd, Lori < >> lori.sheph...@roswellpark.org<mailto:lori.sheph...@roswellpark.org> < >> mailto:lori.sheph...@roswellpark.org<mailto:lori.sheph...@roswellpark.org >> <lori.sheph...@roswellpark.org%3Cmailto:lori.sheph...@roswellpark.org>>>> >> wrote: >> >> It doesn't look like the webhook was ever initialized >> >> >> Please follow the instructions here: >> >> https://github.com/Bioconductor/Contributions/blob/master/ >> CONTRIBUTING.md#adding-a-web-hook >> <https://github.com/Bioconductor/Contributions/blob/master/ >> CONTRIBUTING.md#adding-a-web-hook> >> >> After the webhook is set up you will need to do another version bump >> to trigger the build - Please post further correspondence regarding >> your package submission on the open github issue >> >> >> https://github.com/Bioconductor/Contributions/issues/713 >> <https://github.com/Bioconductor/Contributions/issues/713> >> >> >> Lori Shepherd >> >> Bioconductor Core Team >> >> Roswell Park Cancer Institute >> >> Department of Biostatistics & Bioinformatics >> >> Elm & Carlton Streets >> >> Buffalo, New York 14263 >> >> ------------------------------------------------------------ >> ------------ >> *From:* Pijush Das <topij...@gmail.com<mailto:topij...@gmail.com> < >> mailto:topij...@gmail.com<mailto:topij...@gmail.com >> <topij...@gmail.com%3Cmailto:topij...@gmail.com>>>> >> *Sent:* Tuesday, April 24, 2018 11:33:14 AM >> *To:* Shepherd, Lori >> *Cc:* Morgan, Martin; bioc-devel@r-project.org<mailto: >> bioc-devel@r-project.org> >> <mailto:bioc-devel@r-project.org<mailto:bioc-devel@r-project.org >> <bioc-devel@r-project.org%3Cmailto:bioc-devel@r-project.org>>> >> >> *Subject:* Re: [Bioc-devel] Need some help to submit a R package. >> Dear sir, >> >> >> I have uploaded the sigFeature package ( Version: 0.99.1) in the >> existing git repository and did a version bump. The link is given >> below. >> https://github.com/pijush1285/sigFeature >> <https://github.com/pijush1285/sigFeature> >> But still now I am not getting any response. >> Is there required to add the web hook again ? >> >> Thank you >> >> regards >> Pijush >> >> >> >> On Tue, Apr 24, 2018 at 5:34 PM, Shepherd, Lori >> <lori.sheph...@roswellpark.org<mailto:lori.sheph...@roswellpark.org> >> <mailto:lori.sheph...@roswellpark.org<mailto:Lori.Shepherd@ >> roswellpark.org >> <lori.sheph...@roswellpark.org%3Cmailto:lori.sheph...@roswellpark.org>>>> >> wrote: >> >> We like to keep track of the changes and have the reviews in one >> place. If possible it would be better to replace the contents >> of existing git repository and do a version bump. >> >> >> Lori Shepherd >> >> Bioconductor Core Team >> >> Roswell Park Cancer Institute >> >> Department of Biostatistics & Bioinformatics >> >> Elm & Carlton Streets >> >> Buffalo, New York 14263 >> >> ------------------------------------------------------------ >> ------------ >> *From:* Bioc-devel <bioc-devel-boun...@r-project.org<mailto: >> bioc-devel-boun...@r-project.org> >> <mailto:bioc-devel-boun...@r-project.org<mailto:bioc-devel-b >> oun...@r-project.org >> <bioc-devel-boun...@r-project.org%3Cmailto:bioc-devel-boun...@r-project.org>>>> >> on behalf of Pijush >> Das <topij...@gmail.com<mailto:topij...@gmail.com> < >> mailto:topij...@gmail.com<mailto:topij...@gmail.com >> <topij...@gmail.com%3Cmailto:topij...@gmail.com>>>> >> *Sent:* Tuesday, April 24, 2018 7:43:04 AM >> *To:* Morgan, Martin >> *Cc:* bioc-devel@r-project.org<mailto:bioc-devel@r-project.org> < >> mailto:bioc-devel@r-project.org<mailto:bioc-devel@r-project.org >> <bioc-devel@r-project.org%3Cmailto:bioc-devel@r-project.org>>> >> *Subject:* Re: [Bioc-devel] Need some help to submit a R package. >> Dear Sir, >> >> I have solved most of the issues raised by the reviewers. >> There were significant amount of changes in the original code. >> So should we submit our package (sigFeature) as a new submission >> or replace the contents of existing git repository with version >> increment. >> >> >> regards >> Pijush >> >> >> On Mon, Apr 16, 2018 at 5:01 PM, Martin Morgan < >> martin.mor...@roswellpark.org<mailto:martin.morgan@roswellpa >> rk.org> >> <mailto:martin.mor...@roswellpark.org<mailto:martin.morgan@ >> roswellpark.org >> <martin.mor...@roswellpark.org%3Cmailto:martin.mor...@roswellpark.org>>>> >> wrote: >> >> > If you are still having problems understanding warnings, it is >> probably >> > better to use the github issue -- it may take some time to get >> an answer, >> > because the reviewers have many responsibilities. >> > >> > It looks like your 'webhook' is not correct, and that you are >> not changing >> > the version of your package (from 0.99.0 to 0.99.1, 0.99.2, >> ...) when you >> > wish to generate another build report. @grimbough indicated in >> the github >> > issue how to address these problems. >> > >> > Martin >> > >> > >> > On 04/16/2018 03:58 AM, Pijush Das wrote: >> > >> >> Dear Ruqian, >> >> >> >> >> >> Yes sir, I have opened the build report which is a link to an >> HTML page >> >> with details. >> >> But I unable to understand why the WARNING massages are >> showing. >> >> >> >> Three days before the other reviewers had made some comments >> and asked me >> >> to address >> >> those issues and also told me to solve the NOTEs produced by >> BioCheck. >> >> >> >> Presently I am working on the sigFeature package to address >> those issues. >> >> I shall communicate soon after solving those issues. >> >> >> >> >> >> Thank you >> >> >> >> >> >> Regards >> >> Pijush >> >> >> >> >> >> >> >> On Mon, Apr 16, 2018 at 4:06 AM, Ruqian Lyu < >> >> ruqi...@student.unimelb.edu.au<mailto:ruqianl@student.unimel >> b.edu.au> >> <mailto:ruqi...@student.unimelb.edu.au<mailto:ruqianl@studen >> t.unimelb.edu.au >> <ruqi...@student.unimelb.edu.au%3Cmailto:ruqi...@student.unimelb.edu.au> >> >>> >> >> wrote: >> >> >> >> Hi Pijush, >> >>> >> >>> Did you open the build report which is a link to an HTML page >> with >> >>> details >> >>> of the warning? >> >>> >> >>> >> >>> Regards, >> >>> Ruqian >> >>> >> >>> >> >>> >> >>> On Fri, Apr 13, 2018 at 4:54 PM, Pijush Das < >> topij...@gmail.com<mailto:topij...@gmail.com> < >> mailto:topij...@gmail.com<mailto:topij...@gmail.com >> <topij...@gmail.com%3Cmailto:topij...@gmail.com>>>> wrote: >> >>> >> >>> Dear Sir, >> >>>> >> >>>> >> >>>> I have submitted an R package named "sigFeature" in Github >> and also >> >>>> Bioconductor 9 days before. >> >>>> The reviewers only said that there is some WARNING problem >> in the >> >>>> package >> >>>> in different platform. >> >>>> >> >>>> But after that they are not communicating any thing >> regarding the >> >>>> package. >> >>>> I have checked the package >> >>>> windows and Ubuntu it is working fine. >> >>>> >> >>>> I unable to understand what actually the problem is ? >> >>>> And the reviewers are not communicating about the problem. >> Though I am >> >>>> getting lots of email from bioc-devel dealing with others >> package >> >>>> problem . >> >>>> >> >>>> Please suggest me what should I do now ? >> >>>> >> >>>> >> >>>> >> >>>> >> >>>> Thank you >> >>>> >> >>>> >> >>>> >> >>>> Regards >> >>>> Pijush >> >>>> >> >>>> >> >>>> >> >>>> >> >>>> On Mon, Apr 2, 2018 at 4:26 PM, Turaga, Nitesh < >> >>>> nitesh.tur...@roswellpark.org<mailto:Nitesh.Turaga@roswellpa >> rk.org> >> <mailto:nitesh.tur...@roswellpark.org<mailto:Nitesh.Turaga@ >> roswellpark.org >> <nitesh.tur...@roswellpark.org%3Cmailto:nitesh.tur...@roswellpark.org>>>> >> wrote: >> >>>> >> >>>> Hi, >> >>>>> >> >>>>> Please read through this documentation. >> >>>>> >> >>>>> http://bioconductor.org/developers/package-submission/ >> <http://bioconductor.org/developers/package-submission/> >> >>>>> >> >>>>> >> >>>>> Nitesh >> >>>>> >> >>>>> On Apr 2, 2018, at 2:00 AM, Pijush Das <topij...@gmail.com >> <mailto:topij...@gmail.com> <mailto:topij...@gmail.com<mai >> lto:topij...@gmail.com <topij...@gmail.com%3Cmailto:topij...@gmail.com>>>> >> wrote: >> >>>>>> >> >>>>>> Dear Sir, >> >>>>>> >> >>>>>> >> >>>>>> >> >>>>>> I have developed an R package. I want to submit this >> package in >> >>>>>> Bioconductor. >> >>>>>> Please help me to submit the R package. >> >>>>>> >> >>>>>> >> >>>>>> >> >>>>>> >> >>>>>> >> >>>>>> >> >>>>>> >> >>>>>> >> >>>>>> >> >>>>>> regards >> >>>>>> Pijush Das >> >>>>>> >> >>>>>> [[alternative HTML version deleted]] >> >>>>>> >> >>>>>> _______________________________________________ >> >>>>>> Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> >> <mailto:Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org >> <Bioc-devel@r-project.org%3Cmailto:Bioc-devel@r-project.org>>> >> mailing list >> >>>>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> <https://stat.ethz.ch/mailman/listinfo/bioc-devel> >> >>>>>> >> >>>>> >> >>>>> >> >>>>> >> >>>>> This email message may contain legally privileged and/or >> confidential >> >>>>> information. If you are not the intended recipient(s), or >> the employee >> >>>>> >> >>>> or >> >>>> >> >>>>> agent responsible for the delivery of this message to the >> intended >> >>>>> recipient(s), you are hereby notified that any disclosure, >> copying, >> >>>>> distribution, or use of this email message is prohibited. >> If you have >> >>>>> received this message in error, please notify the sender >> immediately by >> >>>>> e-mail and delete this email message from your computer. >> Thank you. >> >>>>> >> >>>>> >> >>>> [[alternative HTML version deleted]] >> >>>> >> >>>> _______________________________________________ >> >>>> Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> < >> mailto:Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org >> <Bioc-devel@r-project.org%3Cmailto:Bioc-devel@r-project.org>>> >> mailing list >> >>>> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> <https://stat.ethz.ch/mailman/listinfo/bioc-devel> >> >>>> >> >>>> >> >>> >> >>> >> >> [[alternative HTML version deleted]] >> >> >> >> _______________________________________________ >> >> Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> < >> mailto:Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org >> <Bioc-devel@r-project.org%3Cmailto:Bioc-devel@r-project.org>>> >> mailing list >> >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> <https://stat.ethz.ch/mailman/listinfo/bioc-devel> >> >> >> >> >> > >> > This email message may contain legally privileged and/or >> confidential >> > information. If you are not the intended recipient(s), or the >> employee or >> > agent responsible for the delivery of this message to the >> intended >> > recipient(s), you are hereby notified that any disclosure, >> copying, >> > distribution, or use of this email message is prohibited. If >> you have >> > received this message in error, please notify the sender >> immediately by >> > e-mail and delete this email message from your computer. Thank >> you. >> > >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> < >> mailto:Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org >> <Bioc-devel@r-project.org%3Cmailto:Bioc-devel@r-project.org>>> >> mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> <https://stat.ethz.ch/mailman/listinfo/bioc-devel> >> >> This email message may contain legally privileged and/or >> confidential information. If you are not the intended >> recipient(s), or the employee or agent responsible for the >> delivery of this message to the intended recipient(s), you are >> hereby notified that any disclosure, copying, distribution, or >> use of this email message is prohibited. If you have received >> this message in error, please notify the sender immediately by >> e-mail and delete this email message from your computer. Thank >> you. >> >> >> >> This email message may contain legally privileged and/or >> confidential information. If you are not the intended recipient(s), >> or the employee or agent responsible for the delivery of this >> message to the intended recipient(s), you are hereby notified that >> any disclosure, copying, distribution, or use of this email message >> is prohibited. If you have received this message in error, please >> notify the sender immediately by e-mail and delete this email >> message from your computer. Thank you. >> >> >> >> This email message may contain legally privileged and/or confidential >> information. If you are not the intended recipient(s), or the employee or >> agent responsible for the delivery of this message to the intended >> recipient(s), you are hereby notified that any disclosure, copying, >> distribution, or use of this email message is prohibited. If you have >> received this message in error, please notify the sender immediately by >> e-mail and delete this email message from your computer. Thank you. >> >> >> >> This email message may contain legally privileged and/or confidential >> information. If you are not the intended recipient(s), or the employee or >> agent responsible for the delivery of this message to the intended >> recipient(s), you are hereby notified that any disclosure, copying, >> distribution, or use of this email message is prohibited. If you have >> received this message in error, please notify the sender immediately by >> e-mail and delete this email message from your computer. Thank you. >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioc-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> >> This email message may contain legally privileged and/or confidential >> information. If you are not the intended recipient(s), or the employee or >> agent responsible for the delivery of this message to the intended >> recipient(s), you are hereby notified that any disclosure, copying, >> distribution, or use of this email message is prohibited. If you have >> received this message in error, please notify the sender immediately by >> e-mail and delete this email message from your computer. Thank you. >> > > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
