Hello, So, are you absolutely sure nothing has changed in this package? I can still reproduce the hash mismatch.
In GNU Guix, the SHA256 hash is computed when the tarball is downloaded by the person who adds or changes the package. So at some point, the tarball was different (at least to to package maintainer). The MD5 hashes you provided are the *current* hashes and does not say anything about the history of these files. What is their last modification date? Thanks! Kind regards, Roel Janssen ________________________________________ From: Hervé Pagès [[email protected]] Sent: Sunday, July 23, 2017 7:44 PM To: Vincent Carey; Janssen-10, R.R.E. Cc: [email protected] Subject: Re: [Bioc-devel] Change in BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz Hi, BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz was added to Bioconductor in BioC 3.0 and has not changed since then. At least not on master.bioconductor.org. These are the MD5 hashes of the tarball for each version of BioC on master.bioconductor.org: ubuntu@ip-172-30-4-20:/extra/www/bioc/packages$ md5sum 3.*/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz 672a988b28d8602afb2bd5595db7303b 3.0/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz 672a988b28d8602afb2bd5595db7303b 3.1/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz 672a988b28d8602afb2bd5595db7303b 3.2/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz 672a988b28d8602afb2bd5595db7303b 3.3/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz 672a988b28d8602afb2bd5595db7303b 3.4/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz 672a988b28d8602afb2bd5595db7303b 3.5/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz 672a988b28d8602afb2bd5595db7303b 3.6/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz Cheers, H. On 07/23/2017 04:31 AM, Vincent Carey wrote: > I can't reproduce this. Did you get > > 688,190,187 > > bytes in your tar.gz? Could it be an incomplete transfer? > > On Sat, Jul 22, 2017 at 5:47 PM, Janssen-10, R.R.E. < > [email protected]> wrote: > >> Hello, >> >> It seems that the tarball BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz has >> changed, without a change in version: >> >> From >> https://urldefense.proofpoint.com/v2/url?u=http-3A__www.bioconductor.org_packages_release_data_&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=sS7Y9rGFRoKmYrCl4y_IWoYFjj7HImCxWm4hYXClAZc&s=_ruyoTPdHqKb8FyuBLOAVMyZk_8tT1Wc8evh6fGTY2Y&e= >> annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz... >> ...SC.hg19_1.4.0.tar.gz 656.3MiB 5.6MiB/s 01:58 [####################] >> 100.0% >> sha256 hash mismatch for output path `/gnu/store/ >> ml0l7hbplvnxssjcgbwzi8cnmcmnsypi-BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz' >> expected: 0479qx4bapgcp5chj10a63chk0s28x9cx1gamz3f5m3yd7jzwcf2 >> actual: 1y0nqpk8cw5a34sd9hmin3z4v7iqm6hf6l22cl81vlbxqbjibxc8 >> >> What has changed here, and why hasn't the version number been updated >> accordingly? >> >> Kind regards, >> Roel Janssen >> >> >> ------------------------------------------------------------ >> ------------------ >> >> De informatie opgenomen in dit bericht kan vertrouwelijk zijn en is >> uitsluitend bestemd voor de geadresseerde. Indien u dit bericht onterecht >> ontvangt, wordt u verzocht de inhoud niet te gebruiken en de afzender >> direct >> te informeren door het bericht te retourneren. Het Universitair Medisch >> Centrum Utrecht is een publiekrechtelijke rechtspersoon in de zin van de >> W.H.W. >> (Wet Hoger Onderwijs en Wetenschappelijk Onderzoek) en staat geregistreerd >> bij >> de Kamer van Koophandel voor Midden-Nederland onder nr. 30244197. >> >> Denk s.v.p aan het milieu voor u deze e-mail afdrukt. >> >> ------------------------------------------------------------ >> ------------------ >> >> This message may contain confidential information and ...{{dropped:10}} > > _______________________________________________ > [email protected] mailing list > https://urldefense.proofpoint.com/v2/url?u=https-3A__stat.ethz.ch_mailman_listinfo_bioc-2Ddevel&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=sS7Y9rGFRoKmYrCl4y_IWoYFjj7HImCxWm4hYXClAZc&s=VAOo3_yUcI0tg8a9YHMRgdGGea0c4p-P1VB45WIMONk&e= > -- Hervé Pagès Program in Computational Biology Division of Public Health Sciences Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N, M1-B514 P.O. Box 19024 Seattle, WA 98109-1024 E-mail: [email protected] Phone: (206) 667-5791 Fax: (206) 667-1319 _______________________________________________ [email protected] mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
