Hi,
BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz was added to Bioconductor
in BioC 3.0 and has not changed since then. At least not on
master.bioconductor.org. These are the MD5 hashes of the tarball
for each version of BioC on master.bioconductor.org:
ubuntu@ip-172-30-4-20:/extra/www/bioc/packages$ md5sum
3.*/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz
672a988b28d8602afb2bd5595db7303b
3.0/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz
672a988b28d8602afb2bd5595db7303b
3.1/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz
672a988b28d8602afb2bd5595db7303b
3.2/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz
672a988b28d8602afb2bd5595db7303b
3.3/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz
672a988b28d8602afb2bd5595db7303b
3.4/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz
672a988b28d8602afb2bd5595db7303b
3.5/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz
672a988b28d8602afb2bd5595db7303b
3.6/data/annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz
Cheers,
H.
On 07/23/2017 04:31 AM, Vincent Carey wrote:
I can't reproduce this. Did you get
688,190,187
bytes in your tar.gz? Could it be an incomplete transfer?
On Sat, Jul 22, 2017 at 5:47 PM, Janssen-10, R.R.E. <
r.r.e.janssen...@umcutrecht.nl> wrote:
Hello,
It seems that the tarball BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz has
changed, without a change in version:
From
https://urldefense.proofpoint.com/v2/url?u=http-3A__www.bioconductor.org_packages_release_data_&d=DwICAg&c=eRAMFD45gAfqt84VtBcfhQ&r=BK7q3XeAvimeWdGbWY_wJYbW0WYiZvSXAJJKaaPhzWA&m=sS7Y9rGFRoKmYrCl4y_IWoYFjj7HImCxWm4hYXClAZc&s=_ruyoTPdHqKb8FyuBLOAVMyZk_8tT1Wc8evh6fGTY2Y&e=
annotation/src/contrib/BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz...
...SC.hg19_1.4.0.tar.gz 656.3MiB 5.6MiB/s 01:58 [####################]
100.0%
sha256 hash mismatch for output path `/gnu/store/
ml0l7hbplvnxssjcgbwzi8cnmcmnsypi-BSgenome.Hsapiens.UCSC.hg19_1.4.0.tar.gz'
expected: 0479qx4bapgcp5chj10a63chk0s28x9cx1gamz3f5m3yd7jzwcf2
actual: 1y0nqpk8cw5a34sd9hmin3z4v7iqm6hf6l22cl81vlbxqbjibxc8
What has changed here, and why hasn't the version number been updated
accordingly?
Kind regards,
Roel Janssen
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