There is only one general method for this case, on Vector,missing, so it's consistent by definition. Note that ignoreSelf and ignoreRedundant are defunct (and maybe even removed now). The new argument names are drop.self and drop.redundant.
Michael On Wed, Oct 26, 2016 at 3:00 AM, Dario Strbenac <dstr7...@uni.sydney.edu.au> wrote: > Good day, > > For an IRanges object, findOverlaps has ignoreSelf and ignoreRedundant > options. However, these aren't available for a GenomicRanges input object, > even though the subject parameter is optional and a query GRanges object can > be overlapped with itself. Could this be changed to be consistent? > > -------------------------------------- > Dario Strbenac > University of Sydney > Camperdown NSW 2050 > Australia > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
