Also note that the build system does not use devtools to build vignettes, it uses R CMD build.
----- Original Message ----- > From: "Kasper Daniel Hansen" <kasperdanielhan...@gmail.com> > To: "Anand MT" <anand...@hotmail.com> > Cc: "bioc-devel" <bioc-devel@r-project.org> > Sent: Friday, July 15, 2016 8:43:00 PM > Subject: Re: [Bioc-devel] shrunken vignette > If you add a sessionInfo() section to your document (which I highly > recommend) you'll probably realize the two versions are using different > versions of BiocStyle (anything in devel uses BiocStyle level). The > default layout is changing, and I am sure comments or bug reports are > welcome. For example, as rendered right now I would agree the TOC sucks. > > Best, > Kasper > > On Fri, Jul 15, 2016 at 9:53 PM, Anand MT <anand...@hotmail.com> wrote: > >> Hi all, >> My package 'maftools' finally found its homepage today. But when I checked >> the vignette, it has been shrunken. It appears to be html vignette is >> center aligned rather than left aligned. It makes things cluttered and and >> toc looks messy. >> Vignette is here: >> http://bioconductor.org/packages/devel/bioc/vignettes/maftools/inst/doc/maftools.html >> When I build it manually on my computer with devtools::build_vignettes() >> it looks like this. http://poisonalien.github.io - A much cleaner look. >> Do I need to change any thing in markdown file? >> Meta data on my vignette markdown looks like this. >> ---title: "maftools : Summarize, Analyze and Visualize MAF files"author: >> "Anand Mayakonda"date: "`r Sys.Date()`"output: >> BiocStyle::html_document2vignette: > %\VignetteIndexEntry{Summarize, >> Analyze and Visualize MAF files} %\VignetteEngine{knitr::rmarkdown} >> %\VignetteEncoding{UTF-8}--- >> >> Thank you. >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioc-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> > > [[alternative HTML version deleted]] > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
