I just noticed that the addresses for NHGRI GWAS catalog distribution are relative to GRCh38. Is there a plan for using Homo.sapiens with selection of build? It may not be uncommon for someone to want to work with different builds.
What would be useful for me at this time is a simple way to get a Seqinfo structure respecting GRCh38. Also, liftOver seems to have been replaced by NCBI remap. Apparently the new build can also be called hg38, and a chain file exists, so rtracklayer liftOver utility should still succeed. [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel