I just noticed that the addresses for NHGRI GWAS catalog distribution
are relative to GRCh38.  Is there a plan for using Homo.sapiens with
selection of build?  It may not be uncommon for someone to want to
work with different builds.

What would be useful for me at this time is a simple way to get a Seqinfo
structure respecting GRCh38.  Also, liftOver seems to have been replaced
by NCBI remap.  Apparently the new build can also be called hg38, and a
chain
file exists, so rtracklayer liftOver utility should still succeed.

        [[alternative HTML version deleted]]

_______________________________________________
Bioc-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/bioc-devel

Reply via email to