a discussion came up on devel last year about looking at a genomic range
over multiple samples and multiple experiments (
https://stat.ethz.ch/pipermail/bioc-devel/attachments/20120920/93a4fb61/attachment.pl
)
stepping aside the multiple experiment part, I'm interested in
BigWigViews() with fixed ranges across samples. Has there been any more
thoughts in this direction?
BigWigViews would be incredibly useful for genomics applications where we
want to scan along the genome looking at lots of samples. BigWig offers a
concise representation of the information compared to BAM files.
What I am trying now is using import(BigWigFile, which=gr) on files one by
one, and then binding the coverage together.
best,
Mike
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