Hello Nahsivar--

> Thank you for the template script to calculate vdW energies of interacting
> pairs of atoms from a given PDB file.
> I'll try to extend it to calculate other energies such as hydrogen bond
> energy etc.,
> Are there ways to use different forcefields for the same calculations ?
> 

The easiest way to do that at this point is to rerun the calculation
starting with different topology and parameter files.

best regards--
Charles
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