Well, as you guessed, it does seem to be something to do with the interaction between bidi and pstricks.

Here is a minimal example with no bidi, which shows the line numbers along with a figure, etc.

-----------------------

\documentclass{article}

\usepackage{pstricks}
\usepackage{pst-eps}


\usepackage[Bpara,modulo,right,addpageno,perpage,para*]{ednotes}
\modulolinenumbers[5]

\begin{document}

%\begin{arab}
\resetlinenumber\pagewiselinenumbers

\Anote{a lemma}{with a note.}

\Anote{another line with another lemma}{and the note.}

\Anote{we have the same thing again}{and there's a note.}

\Anote{a fourth lemma}{a fourth note.}

we should now have a line number

\vspace{2em}

\begin{center}
\begin{pspicture}(0,0)(3,3)
\psline[linewidth=1pt](0,0)(0,3)  %base
 \psline[linewidth=1pt](0,0)(3,0) %2e base
\psline[linewidth=1pt](0,3)(3,3)  %3e base
\psline[linewidth=1pt](3,0)(3,3)  %oblique 1
\psline[linewidth=1pt](0,3)(3,0)  %oblique 1
\rput(1.5,2.4){{lalala}}
\rput(1.5,3.278){{lalala}}
\rput*[0,0]{-45}(0.23,1.74){{dedum}}
\rput*[0,0]{-90}(3.125,2.1){{dedum}}
\rput*[0,0]{-90}(-0.7,2.1){{ladida}}
\rput(1.5,-0.275){{ladidum}}
\end{pspicture}
\end{center}

\end{document}

----------------

In the next example, we have six lines of Arabic text and we can toggle the marginal line numbers on and off by commenting and uncommenting pstricks.

\documentclass{article}

%\usepackage{pstricks}

\usepackage[Bpara,modulo,right,addpageno,perpage,para*]{ednotes}
\modulolinenumbers[5]


\usepackage{fontspec}
\usepackage[novoc,fdf2noalif]{arabxetex}
\newfontfamily\arabicfont[Script=Arabic,Scale=1.4,WordSpace=2]{Scheherazade}

% To make language switching faster:
% For some reason, \textroman was not working out-of-the-box...
\newcommand{\textroman}[1]{\LR{\rmfamily #1}}
% And we make some short-hands
\newcommand{\R}{\textroman}
\newcommand{\A}{\textarabic}% Lateef, Scheherazade

\begin{document}

%\begin{arab}
\resetlinenumber\pagewiselinenumbers

\begin{arab}
\resetlinenumber\pagewiselinenumbers

\begin{center}
%
\Anote{\A{\notinnote\Huge ktAb fY AlmsA.hT}}{\A{^gzu' fY msA.hT AlAr.dyn \R{(\textit{rubro col.})}.}}

\medskip
{\Large l|l^sy_h Al`Alm ^s^gA` bn Aslm Alm`rwf b'ab--Y kAml}

\medskip
{\Large r.hmh Al|llh bkrmh}

\medskip
{\Large ^Amyn}

\bigskip
\R{\marginpar{$(93\textsuperscript{\bf v})$}}
bsm Al|llh Alr.hmn Alr.hym \LR{\quad} w.sllY Al|llh `lY syydnA m.hmmd w^Alh

\smallskip
\noindent
qAl ^s^gA` Abn Aslm Alm`rwf b'ab--Y kAml

\bigskip
\centerline{\Large bAb msA.hT Al'ar.dyn}
\end{center}

\end{arab}

\end{document}




On 11/09/21 23:52, VAFA KHALIGHI wrote:
do you have a minimal example? Can you create one where bidi is not loaded at all? maybe endnotes does not behave well with pstricks.

On Thu, Sep 22, 2011 at 12:48 AM, Nathan Sidoli <nathan.sid...@utoronto.ca <mailto:nathan.sid...@utoronto.ca>> wrote:

    I have tried loading them in every possible order, but as soon as
    I load pstricks the marginal numbers disappear.


    On 11/09/21 23:43, VAFA KHALIGHI wrote:
    No, I think it has to do with something that tikzpicture or
    pspicture environment are in LTR mode by bidi. you can load
    endnotes anywhere you want but certainly bidi gives you error if
    you load tikz or pstricks after bidi, thus you only will have to
    load tikz or pstricks before bidi.

    2011/9/22 Zdenek Wagner <zdenek.wag...@gmail.com
    <mailto:zdenek.wag...@gmail.com>>

        2011/9/21 VAFA KHALIGHI <vafa...@gmail.com
        <mailto:vafa...@gmail.com>>:
        > I am not sure what is the actual problem but I can tell you
        what bidi does.
        > bidi does the following:
        >
        Can it depend on the order in which the packages are loaded?
        This is
        what I would try. My feeling is that the correct order would
        be tikz,
        endnote, bidi.

        > 1- makes l and r logical such that l means always left and
        r always means
        > right (in both RTL and LTR).
        >
        > 2- bidi automatically puts tikzpicture and pspicture
        envoronments in LTR
        > mode mainly for two reasons:
        > a) RTL picture environment does not make sense.
        > b) XeTeX in RTL mode, with \special has bugs and tikz and
        pstricks both uses
        > \special so we have no other choice but putting pspicture
        and tikzpicture
        > inside LTR mode.
        >
        > On Thu, Sep 22, 2011 at 12:26 AM, Nathan Sidoli
        <nathan.sid...@utoronto.ca <mailto:nathan.sid...@utoronto.ca>>
        > wrote:
        >>
        >> I realize this is not strictly speaking a XeTeX issue, but
        I am
        >> typesetting a critical edition of an Arabic text using
        XeLaTeX with the
        >> ednotes package and I want to be able to make the diagrams
        for the text
        >> using either pstricks or TikZ so that the Arabic fonts can
        be changed in the
        >> text and diagrams simply by toggling the initial font setting.
        >>
        >> When I load either of these graphics packages, however,
        the line numbers
        >> in the margins of the Arabic text disappear.
        >>
        >> Has any one had a similar problem? Can any one think of a
        possible
        >> solution?
        >>
        >> I can work on a minimal example, but it will probably not
        be that minimal.
        >>
        >>
        >>
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        --
        Zdene(k Wagner
        http://hroch486.icpf.cas.cz/wagner/
        http://icebearsoft.euweb.cz



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