Thanks, I looked through previous emails here in the user list. I guess I need to subscribe to the
Developers list.
-Ray Muno
On 9/29/21 9:58 AM, Jeff Squyres (jsquyres) wrote:
Ray --
Looks like this is a dup of https://github.com/open-mpi/ompi/issues/8919
<https://github.com/open-mpi/ompi/issues/8919>.
On Sep 29, 2021, at 10:47 AM, Ray Muno via users <users@lists.open-mpi.org m
<mailto:users@lists.open-mpi.org>> wrote:
Looking to compile
OpenMPI 4.1.1
under Centos 7.9, (with Mellanox OFED 5.3 stack)
with the nVidia HPC-SDK, version 21.7.
Configure works, build fails.
The nvidia HPC-SDK is using their environmental module which sets these
variables, etc.
setenvNVHPC /stage/opt/NV_hpc_sdk
setenvCC /stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/compilers/bin/nvc
setenvCXX /stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/compilers/bin/nvc++
setenvFC /stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/compilers/bin/nvfortran
setenvF90 /stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/compilers/bin/nvfortran
setenvF77 /stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/compilers/bin/nvfortran
setenvCPP cpp
prepend-pathPATH /stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/cuda/bin
prepend-pathPATH /stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/compilers/bin
prepend-pathPATH /stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/compilers/extras/qd/bin
prepend-pathLD_LIBRARY_PATH /stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/cuda/lib64
prepend-pathLD_LIBRARY_PATH
/stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/cuda/extras/CUPTI/lib64
prepend-pathLD_LIBRARY_PATH
/stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/compilers/extras/qd/lib
prepend-pathLD_LIBRARY_PATH
/stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/compilers/lib
prepend-pathLD_LIBRARY_PATH
/stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/math_libs/lib64
prepend-pathLD_LIBRARY_PATH
/stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/comm_libs/nccl/lib
prepend-pathLD_LIBRARY_PATH
/stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/comm_libs/nvshmem/lib
prepend-pathCPATH /stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/math_libs/include
prepend-pathCPATH /stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/comm_libs/nccl/include
prepend-pathCPATH
/stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/comm_libs/nvshmem/include
prepend-pathCPATH
/stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/compilers/extras/qd/include/qd
prepend-pathMANPATH /stage/opt/NV_hpc_sdk/Linux_x86_64/21.7/compilers/man
-------------------------------------------------------------------
configure --prefix=/stage/opt/OpenMPI/ROME/4.1.1/NV-HPC/21.7 CC=nvc CXX=nvc++
FC=nvfortran
...
FCLD libmpi_usempif08.la <http://libmpi_usempif08.la>
/usr/bin/ld: .libs/comm_spawn_multiple_f08.o: relocation R_X86_64_32S against `.rodata' can not be
used when making a shared object; recompile with -fPIC
/usr/bin/ld: .libs/startall_f08.o: relocation R_X86_64_32S against `.rodata' can not be used when
making a shared object; recompile with -fPIC
/usr/bin/ld: .libs/testall_f08.o: relocation R_X86_64_32S against `.rodata' can not be used when
making a shared object; recompile with -fPIC
/usr/bin/ld: .libs/testany_f08.o: relocation R_X86_64_32S against `.rodata' can not be used when
making a shared object; recompile with -fPIC
/usr/bin/ld: .libs/testsome_f08.o: relocation R_X86_64_32S against `.rodata' can not be used when
making a shared object; recompile with -fPIC
/usr/bin/ld: .libs/type_create_struct_f08.o: relocation R_X86_64_32S against `.rodata' can not be
used when making a shared object; recompile with -fPIC
/usr/bin/ld: .libs/type_get_contents_f08.o: relocation R_X86_64_32S against `.rodata' can not be
used when making a shared object; recompile with -fPIC
/usr/bin/ld: .libs/waitall_f08.o: relocation R_X86_64_32S against `.rodata' can not be used when
making a shared object; recompile with -fPIC
/usr/bin/ld: .libs/waitany_f08.o: relocation R_X86_64_32S against `.rodata' can not be used when
making a shared object; recompile with -fPIC
/usr/bin/ld: .libs/waitsome_f08.o: relocation R_X86_64_32S against `.rodata' can not be used when
making a shared object; recompile with -fPIC
/usr/bin/ld: profile/.libs/pcomm_spawn_multiple_f08.o: relocation R_X86_64_32S against `.rodata'
can not be used when making a shared object; recompile with -fPIC
/usr/bin/ld: profile/.libs/pstartall_f08.o: relocation R_X86_64_32S against `.rodata' can not be
used when making a shared object; recompile with -fPIC
/usr/bin/ld: profile/.libs/ptestall_f08.o: relocation R_X86_64_32S against `.rodata' can not be
used when making a shared object; recompile with -fPIC
/usr/bin/ld: profile/.libs/ptestany_f08.o: relocation R_X86_64_32S against `.rodata' can not be
used when making a shared object; recompile with -fPIC
/usr/bin/ld: profile/.libs/ptestsome_f08.o: relocation R_X86_64_32S against `.rodata' can not be
used when making a shared object; recompile with -fPIC
/usr/bin/ld: profile/.libs/ptype_create_struct_f08.o: relocation R_X86_64_32S against `.rodata'
can not be used when making a shared object; recompile with -fPIC
/usr/bin/ld: profile/.libs/ptype_get_contents_f08.o: relocation R_X86_64_32S against `.rodata' can
not be used when making a shared object; recompile with -fPIC
/usr/bin/ld: profile/.libs/pwaitall_f08.o: relocation R_X86_64_32S against `.rodata' can not be
used when making a shared object; recompile with -fPIC
/usr/bin/ld: profile/.libs/pwaitany_f08.o: relocation R_X86_64_32S against `.rodata' can not be
used when making a shared object; recompile with -fPIC
/usr/bin/ld: profile/.libs/pwaitsome_f08.o: relocation R_X86_64_32S against `.rodata' can not be
used when making a shared object; recompile with -fPIC
/usr/bin/ld: .libs/abort_f08.o: relocation R_X86_64_PC32 against symbol `ompi_abort_f' can not be
used when making a shared object; recompile with -fPIC
/usr/bin/ld: final link failed: Bad value
make[2]: *** [libmpi_usempif08.la <http://libmpi_usempif08.la>] Error 2
make[2]: Leaving directory
`/project/muno/OpenMPI/BUILD/4.1.1/ROME/NV-HPC/21.7/ompi/mpi/fortran/use-mpi-f08'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory
`/project/muno/OpenMPI/BUILD/4.1.1/ROME/NV-HPC/21.7/ompi'
make: *** [all-recursive] Error 1
--
Ray Muno
IT Systems Administrator
e-mail: m...@umn.edu <mailto:m...@umn.edu>
University of Minnesota
Aerospace Engineering and Mechanics
--
Jeff Squyres
jsquy...@cisco.com <mailto:jsquy...@cisco.com>
--
Ray Muno
IT Systems Administrator
e-mail: m...@umn.edu
Phone: (612) 625-9531
University of Minnesota
Aerospace Engineering and Mechanics
110 Union St. S.E.
Minneapolis, MN 55455
