Thank you for your response. I attached the results of using :valgrind --tool=memcheck --leak-check=yes -v
valgrind --tool=memcheck --leak-check=yes -v mpirun -np 8 -mca btl vader,self,tcp -mca btl_tcp_eager_limit 4095 -x LD_LIBRARY_PATH ./chimere.e في الجمعة، 28 سبتمبر 2018 في 7:03 م تمت كتابة ما يلي بواسطة Ralph H Castain <r...@open-mpi.org>: > Ummm…looks like you have a problem in your input deck to that application. > Not sure what we can say about it… > > > > On Sep 28, 2018, at 9:47 AM, Zeinab Salah <zeinabsa...@gmail.com> wrote: > > > > Hi everyone, > > I use openmpi-3.0.2 and I want to run chimere model with 8 processors, > but in the step of parallel mode, the run stopped with the following error > message, > > Please could you help me? > > Thank you in advance > > Zeinab > > > > +++ CHIMERE RUNNING IN PARALLEL MODE +++ > > MPI SUB-DOMAINS : > > rank izstart izend nzcount imstart imend nmcount i j > > -------------------------------------------------------------------- > > 1 1 14 14 1 22 22 1 1 > > 2 15 27 13 1 22 22 2 1 > > 3 28 40 13 1 22 22 3 1 > > 4 41 53 13 1 22 22 4 1 > > 5 1 14 14 23 43 21 1 2 > > 6 15 27 13 23 43 21 2 2 > > 7 28 40 13 23 43 21 3 2 > > 8 41 53 13 23 43 21 4 2 > > Sub domain dimensions: 14 22 > > > > boundary conditions: > /home/dream/CHIMERE/chimere2017r4/../BIGFILES/OUTPUTS/Test/../INIBOUN.10/BOUN_CONCS.2009030700_2009030900_Test.list > > 3 boundary conditions file(s) found > > Opening > /home/dream/CHIMERE/chimere2017r4/../BIGFILES/OUTPUTS/Test/../INIBOUN.10/BOUN_CONCS.2009030700_2009030900_Test.nc-gas > > Opening > /home/dream/CHIMERE/chimere2017r4/../BIGFILES/OUTPUTS/Test/../INIBOUN.10/BOUN_CONCS.2009030700_2009030900_Test.nc-aer > > Opening > /home/dream/CHIMERE/chimere2017r4/../BIGFILES/OUTPUTS/Test/../INIBOUN.10/BOUN_CONCS.2009030700_2009030900_Test.nc-dust > > Opening > /home/dream/CHIMERE/chimere2017r4/../BIGFILES/OUTPUTS/Test/../INIBOUN.10/BOUN_CONCS.2009030700_2009030900_Test.nc-gas > > Opening > /home/dream/CHIMERE/chimere2017r4/../BIGFILES/OUTPUTS/Test/../INIBOUN.10/BOUN_CONCS.2009030700_2009030900_Test.nc-aer > > Opening > /home/dream/CHIMERE/chimere2017r4/../BIGFILES/OUTPUTS/Test/../INIBOUN.10/BOUN_CONCS.2009030700_2009030900_Test.nc-dust > > ------------------------------------------------------- > > Primary job terminated normally, but 1 process returned > > a non-zero exit code. Per user-direction, the job has been aborted. > > ------------------------------------------------------- > > > -------------------------------------------------------------------------- > > mpirun noticed that process rank 5 with PID 0 on node localhost exited > on signal 9 (Killed). > > > -------------------------------------------------------------------------- > > > > real 3m51.733s > > user 0m5.044s > > sys 1m8.617s > > Abnormal termination of step2.sh > > > > _______________________________________________ > > users mailing list > > users@lists.open-mpi.org > > https://lists.open-mpi.org/mailman/listinfo/users > > _______________________________________________ > users mailing list > users@lists.open-mpi.org > https://lists.open-mpi.org/mailman/listinfo/users
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