Jackson,

one more thing, how did you build openmpi ?

if you built from git (and without VPATH), then --enable-debug is automatically set, and this is hurting performance. if not already done, i recommend you download the latest openmpi tarball (1.10.2) and
./configure --with-platform=contrib/platform/optimized --prefix=...
last but not least, you can
mpirun --mca mpi_leave_pinned 1 <your benchmark>
(that being said, i am not sure this is useful with TCP networks ...)

Cheers,

Gilles



On 3/9/2016 11:34 AM, Rayson Ho wrote:
If you are using instance types that support SR-IOV (aka. "enhanced networking" in AWS), then turn it on. We saw huge differences when SR-IOV is enabled

http://blogs.scalablelogic.com/2013/12/enhanced-networking-in-aws-cloud.html
http://blogs.scalablelogic.com/2014/01/enhanced-networking-in-aws-cloud-part-2.html

Make sure you start your instances with a placement group -- otherwise, the instances can be data centers apart!

And check that jumbo frames are enabled properly:

http://docs.aws.amazon.com/AWSEC2/latest/UserGuide/network_mtu.html

But still, it is interesting that Intel MPI is getting a 2X speedup with the same setup! Can you post the raw numbers so that we can take a deeper look??

Rayson

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Open Grid Scheduler - The Official Open Source Grid Engine
http://gridscheduler.sourceforge.net/
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On Tue, Mar 8, 2016 at 9:08 AM, Jackson, Gary L. <gary.jack...@jhuapl.edu <mailto:gary.jack...@jhuapl.edu>> wrote:


    I've built OpenMPI 1.10.1 on Amazon EC2. Using NetPIPE, I'm seeing
    about half the performance for MPI over TCP as I do with raw TCP.
    Before I start digging in to this more deeply, does anyone know
    what might cause that?

    For what it's worth, I see the same issues with MPICH, but I do
    not see it with Intel MPI.

-- Gary Jackson


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