Thanks for the suggestion Ryan, I will remove the symlinks and start try again. I checked config.log, and it appears that the configure finds cuda support, (result: yes), but once configure checks for cuda.h usability, conftest.c reports that a fatal error occurred, 'cuda.h no such file or directory.'
I have copied here some grep'ed output of config.log $ ./configure --prefix=/usr/local --with-cuda=/usr/local/cuda-6.5 --enable-mpi-java configure:9829: checking if --with-cuda is set configure:9883: result: found (/usr/local/cuda-6.5/include/cuda.h) | #include </usr/local/cuda-6.5/include/cuda.h> configure:10055: checking if have cuda support configure:10058: result: yes (-I/usr/local/cuda-6.5) configure:66435: result: '--prefix=/usr/local' '--with-cuda=/usr/local/cuda-6.5' '--enable-mpi-java' configure:74182: checking cuda.h usability conftest.c:643:18: fatal error: cuda.h: No such file or directory #include <cuda.h> | #include <cuda.h> configure:74182: checking cuda.h presence conftest.c:610:18: fatal error: cuda.h: No such file or directory #include <cuda.h> | #include <cuda.h> configure:74182: checking for cuda.h configure:74265: checking cuda_runtime_api.h usability conftest.c:643:30: fatal error: cuda_runtime_api.h: No such file or directory #include <cuda_runtime_api.h> | #include <cuda_runtime_api.h> configure:74265: checking cuda_runtime_api.h presence conftest.c:610:30: fatal error: cuda_runtime_api.h: No such file or directory #include <cuda_runtime_api.h> | #include <cuda_runtime_api.h> configure:74265: checking for cuda_runtime_api.h configure:97946: running /bin/bash './configure' --disable-dns --disable-http --disable-rpc --disable-openssl --enable-thread-support --disable-evport '--prefix=/usr/local' '--with-cuda=/usr/local/cuda-6.5' '--enable-mpi-java' --cache-file=/dev/null --srcdir=. --disable-option-checking configure:187066: result: verbs_usnic, ugni, sm, verbs, cuda configure:193532: checking for MCA component common:cuda compile mode configure:193585: checking if MCA component common:cuda can compile ________________________________ From: users <users-boun...@open-mpi.org> on behalf of Novosielski, Ryan <novos...@ca.rutgers.edu> Sent: Friday, January 22, 2016 1:20 AM To: Open MPI Users Subject: Re: [OMPI users] configuring open mpi 10.1.2 with cuda on NVIDIA TK1 I would check config.log carefully to see what specifically failed or wasn't found where. I would never mess around with the contents of /usr/include. That is sloppy stuff and likely to get you into trouble someday. ____ *Note: UMDNJ is now Rutgers-Biomedical and Health Sciences* || \\UTGERS |---------------------*O*--------------------- ||_// Biomedical | Ryan Novosielski - Senior Technologist || \\ and Health | novos...@rutgers.edu<mailto:novos...@rutgers.edu>- 973/972.0922 (2x0922) || \\ Sciences | OIRT/High Perf & Res Comp - MSB C630, Newark `' On Jan 21, 2016, at 17:45, Kuhl, Spencer J <spencer-k...@uiowa.edu<mailto:spencer-k...@uiowa.edu>> wrote: Openmpi 1.10.2 cuda.h and cuda_runtime_api.h exist in /usr/local/cuda-6.5/include using the configure trigger ./configure --with-cuda does not find cuda.h or cuda_runtime_api.h using the configure trigger ./configure --with-cuda=/usr/local/cuda-6.5 does not find cuda.h or cuda_runtime_api.h either. However, I found a stack exchange article where someone tried to symlink cuda.h and cuda_runtime_api.h to /usr/include and then it configured fine for that user. I did the same thing, created symlinks of those to header files cuda.h and cuda_runtime_api.h to /usr/include and my ./configure got past cuda.h successfully, but not past cuda_runtime_api.h Any suggestions? Thanks Spencer _______________________________________________ users mailing list us...@open-mpi.org<mailto:us...@open-mpi.org> Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users Link to this post: http://www.open-mpi.org/community/lists/users/2016/01/28331.php
