Hi Mike,
11:18 bjm900@raijin7 ~ > rpm -qi hcoll Name : hcoll Relocations: /opt/mellanox/hcoll Version : 2.0.472 Vendor: mellanox Release : 1 Build Date: Sun Jan 5 23:40:18 2014 Install Date: Fri Jun 12 15:00:23 2015 Build Host: localhost Group : Applications Source RPM: hcoll-2.0.472-1.src.rpm Size : 14074151 License: Proprietary Signature : DSA/SHA1, Sun Feb 23 23:20:58 2014, Key ID c5ed83e26224c050 Packager : mellanox URL : http://www.mellanox.com Summary : Hierarchical collectives (HCOLL) Description : HCOLL... I also just realised that it doesn’t work for any OpenMPI 1.8.x series or 1.10.0 either – while it is able to build (unlike for 1.10.1) it fails at runtime with a symbol lookup error: symbol lookup error: /apps/openmpi/1.8.8/lib/openmpi/mca_coll_hcoll.so: undefined symbol: hcoll_check_mem_release_cb_needed That symbol doesn’t appear to be in any of the .so files in /opt/mellanox/hcoll, so I’m guessing it’s from a newer version of hcoll. This would also explain why it warned about an implicit declaration of this symbol during the builds: ../../../../../../../../ompi/mca/coll/hcoll/coll_hcoll_module.c:263: warning: implicit declaration of function 'hcoll_check_mem_release_cb_needed' Cheers, Ben From: users [mailto:users-boun...@open-mpi.org] On Behalf Of Mike Dubman Sent: Thursday, 24 December 2015 7:14 AM To: Open MPI Users <us...@open-mpi.org> Subject: Re: [OMPI users] hcoll API in 1.10.1 Hi, hcoll is part of MOFED or comes from HPCx. what version of hcoll do you have on your system? Thx On Wed, Dec 23, 2015 at 4:58 AM, Ben Menadue <ben.mena...@nci.org.au <mailto:ben.mena...@nci.org.au> > wrote: Hi, It's probably in plain sight somewhere and I missed it, but is there a minimum version of hcoll needed to build 1.10.1? We have 2.0.0, which allows us to build 1.10.0, but 1.10.1 fails with missing entries in the hcoll_collectives_t structure: CC coll_hcoll_module.lo ../../../../../../../../ompi/mca/coll/hcoll/coll_hcoll_module.c: In function 'mca_coll_hcoll_mem_release_cb': ../../../../../../../../ompi/mca/coll/hcoll/coll_hcoll_module.c:60: warning: implicit declaration of function 'hcoll_mem_unmap' ../../../../../../../../ompi/mca/coll/hcoll/coll_hcoll_module.c: In function 'hcoll_comm_attr_del_fn': ../../../../../../../../ompi/mca/coll/hcoll/coll_hcoll_module.c:166: warning: implicit declaration of function 'hcoll_group_destroy_notify' ../../../../../../../../ompi/mca/coll/hcoll/coll_hcoll_module.c: In function 'mca_coll_hcoll_comm_query': ../../../../../../../../ompi/mca/coll/hcoll/coll_hcoll_module.c:263: warning: implicit declaration of function 'hcoll_check_mem_release_cb_needed' ../../../../../../../../ompi/mca/coll/hcoll/coll_hcoll_module.c:317: error: 'hcoll_collectives_t' has no member named 'coll_alltoallv' ../../../../../../../../ompi/mca/coll/hcoll/coll_hcoll_module.c:318: error: 'hcoll_collectives_t' has no member named 'coll_gatherv' ../../../../../../../../ompi/mca/coll/hcoll/coll_hcoll_module.c:324: error: 'hcoll_collectives_t' has no member named 'coll_igatherv' It looks like PR567 in the 1.10 branch that added the new references. Cheers, Ben _______________________________________________ users mailing list us...@open-mpi.org <mailto:us...@open-mpi.org> Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users Link to this post: http://www.open-mpi.org/community/lists/users/2015/12/28200.php -- Kind Regards, M.
