Thanks Marcin. I think we have three things we need to address:

1. the warning needs to be emitted regardless of whether or not 
—report-bindings was given. Not sure how that warning got “covered” by the 
option, but it is clearly a bug

2. improve the warning to include binding info - relatively easy to do

3. fix the mapping/binding under asymmetric topologies. Given further info and 
consideration, I’m increasingly pushed towards the “fallback to the map-by core 
default” solution. It provides a predictable and consistent pattern. The other 
solution is technically viable, but leads to an unpredictable “opportunistic” 
result that might cause odd application behavior. If the user specifies a 
mapping option and we can’t do it because of asymmetry, then error out.

HTH
Ralph


> On Oct 5, 2015, at 9:36 AM, marcin.krotkiewski <marcin.krotkiew...@gmail.com> 
> wrote:
> 
> Hi, Gilles
>> 
>> you mentionned you had one failure with 1.10.1rc1 and -bind-to core
>> could you please send the full details (script, allocation and output)
>> in your slurm script, you can do
>> srun -N $SLURM_NNODES -n $SLURM_NNODES --cpu_bind=none -l grep 
>> Cpus_allowed_list /proc/self/status
>> before invoking mpirun
>> 
> It was an interactive job allocated with
> 
> salloc --account=staff --ntasks=32 --mem-per-cpu=2G --time=120:0:0
> 
> The slurm environment is the following
> 
> SLURM_JOBID=12714491
> SLURM_JOB_CPUS_PER_NODE='4,2,5(x2),4,7,5'
> SLURM_JOB_ID=12714491
> SLURM_JOB_NODELIST='c1-[2,4,8,13,16,23,26]'
> SLURM_JOB_NUM_NODES=7
> SLURM_JOB_PARTITION=normal
> SLURM_MEM_PER_CPU=2048
> SLURM_NNODES=7
> SLURM_NODELIST='c1-[2,4,8,13,16,23,26]'
> SLURM_NODE_ALIASES='(null)'
> SLURM_NPROCS=32
> SLURM_NTASKS=32
> SLURM_SUBMIT_DIR=/cluster/home/marcink
> SLURM_SUBMIT_HOST=login-0-1.local
> SLURM_TASKS_PER_NODE='4,2,5(x2),4,7,5'
> 
> The output of the command you asked for is
> 
> 0: c1-2.local  Cpus_allowed_list:        1-4,17-20
> 1: c1-4.local  Cpus_allowed_list:        1,15,17,31
> 2: c1-8.local  Cpus_allowed_list:        0,5,9,13-14,16,21,25,29-30
> 3: c1-13.local  Cpus_allowed_list:       3-7,19-23
> 4: c1-16.local  Cpus_allowed_list:       12-15,28-31
> 5: c1-23.local  Cpus_allowed_list:       2-4,8,13-15,18-20,24,29-31
> 6: c1-26.local  Cpus_allowed_list:       1,6,11,13,15,17,22,27,29,31
> 
> Running with command
> 
> mpirun --mca rmaps_base_verbose 10 --hetero-nodes --bind-to core 
> --report-bindings --map-by socket -np 32 ./affinity
> 
> I have attached two output files: one for the original 1.10.1rc1, one for the 
> patched version.
> 
> When I said 'failed in one case' I was not precise. I got an error on node 
> c1-8, which was the first one to have different number of MPI processes on 
> the two sockets. It would also fail on some later nodes, just that because of 
> the error we never got there.
> 
> Let me know if you need more.
> 
> Marcin
> 
> 
> 
> 
> 
> 
> 
>> Cheers,
>> 
>> Gilles
>> 
>> On 10/4/2015 11:55 PM, marcin.krotkiewski wrote:
>>> Hi, all,
>>> 
>>> I played a bit more and it seems that the problem results from
>>> 
>>> trg_obj = opal_hwloc_base_find_min_bound_target_under_obj()
>>> 
>>> called in rmaps_base_binding.c / bind_downwards being wrong. I do not know 
>>> the reason, but I think I know when the problem happens (at least on 
>>> 1.10.1rc1). It seems that by default openmpi maps by socket. The error 
>>> happens when for a given compute node there is a different number of cores 
>>> used on each socket. Consider previously studied case (the debug outputs I 
>>> sent in last post). c1-8, which was source of error, has 5 mpi processes 
>>> assigned, and the cpuset is the following:
>>> 
>>> 0, 5, 9, 13, 14, 16, 21, 25, 29, 30
>>> 
>>> Cores 0,5 are on socket 0, cores 9, 13, 14 are on socket 1. Binding 
>>> progresses correctly up to and including core 13 (see end of file 
>>> out.1.10.1rc2, before the error). That is 2 cores on socket 0, and 2 cores 
>>> on socket 1. Error is thrown when core 14 should be bound - extra core on 
>>> socket 1 with no corresponding core on socket 0. At that point the returned 
>>> trg_obj points to the first core on the node (os_index 0, socket 0).
>>> 
>>> I have submitted a few other jobs and I always had an error in such 
>>> situation. Moreover, if I now use --map-by core instead of socket, the 
>>> error is gone, and I get my expected binding:
>>> 
>>> rank 0 @ compute-1-2.local  1, 17,
>>> rank 1 @ compute-1-2.local  2, 18,
>>> rank 2 @ compute-1-2.local  3, 19,
>>> rank 3 @ compute-1-2.local  4, 20,
>>> rank 4 @ compute-1-4.local  1, 17,
>>> rank 5 @ compute-1-4.local  15, 31,
>>> rank 6 @ compute-1-8.local  0, 16,
>>> rank 7 @ compute-1-8.local  5, 21,
>>> rank 8 @ compute-1-8.local  9, 25,
>>> rank 9 @ compute-1-8.local  13, 29,
>>> rank 10 @ compute-1-8.local  14, 30,
>>> rank 11 @ compute-1-13.local  3, 19,
>>> rank 12 @ compute-1-13.local  4, 20,
>>> rank 13 @ compute-1-13.local  5, 21,
>>> rank 14 @ compute-1-13.local  6, 22,
>>> rank 15 @ compute-1-13.local  7, 23,
>>> rank 16 @ compute-1-16.local  12, 28,
>>> rank 17 @ compute-1-16.local  13, 29,
>>> rank 18 @ compute-1-16.local  14, 30,
>>> rank 19 @ compute-1-16.local  15, 31,
>>> rank 20 @ compute-1-23.local  2, 18,
>>> rank 29 @ compute-1-26.local  11, 27,
>>> rank 21 @ compute-1-23.local  3, 19,
>>> rank 30 @ compute-1-26.local  13, 29,
>>> rank 22 @ compute-1-23.local  4, 20,
>>> rank 31 @ compute-1-26.local  15, 31,
>>> rank 23 @ compute-1-23.local  8, 24,
>>> rank 27 @ compute-1-26.local  1, 17,
>>> rank 24 @ compute-1-23.local  13, 29,
>>> rank 28 @ compute-1-26.local  6, 22,
>>> rank 25 @ compute-1-23.local  14, 30,
>>> rank 26 @ compute-1-23.local  15, 31,
>>> 
>>> Using --map-by core seems to fix the issue on 1.8.8, 1.10.0 and 1.10.1rc1. 
>>> However, there is still a difference in behavior between 1.10.1rc1 and 
>>> earlier versions. In the SLURM job described in last post, 1.10.1rc1 fails 
>>> to bind only in 1 case, while the earlier versions fail in 21 out of 32 
>>> cases. You mentioned there was a bug in hwloc. Not sure if it can explain 
>>> the difference in behavior.
>>> 
>>> Hope this helps to nail this down.
>>> 
>>> Marcin
>>> 
>>> 
>>> 
>>> 
>>> On 10/04/2015 09:55 AM, Gilles Gouaillardet wrote:
>>>> Ralph,
>>>> 
>>>> I suspect ompi tries to bind to threads outside the cpuset.
>>>> this could be pretty similar to a previous issue when ompi tried to bind 
>>>> to cores outside the cpuset.
>>>> /* when a core has more than one thread, would ompi assume all the threads 
>>>> are available if the core is available ? */
>>>> I will investigate this from tomorrow
>>>> 
>>>> Cheers,
>>>> 
>>>> Gilles
>>>> 
>>>> On Sunday, October 4, 2015, Ralph Castain < 
>>>> <mailto:r...@open-mpi.org>r...@open-mpi.org <mailto:r...@open-mpi.org>> 
>>>> wrote:
>>>> Thanks - please go ahead and release that allocation as I’m not going to 
>>>> get to this immediately. I’ve got several hot irons in the fire right now, 
>>>> and I’m not sure when I’ll get a chance to track this down.
>>>> 
>>>> Gilles or anyone else who might have time - feel free to take a gander and 
>>>> see if something pops out at you.
>>>> 
>>>> Ralph
>>>> 
>>>> 
>>>>> On Oct 3, 2015, at 11:05 AM, marcin.krotkiewski < 
>>>>> <>marcin.krotkiew...@gmail.com <mailto:marcin.krotkiew...@gmail.com>> 
>>>>> wrote:
>>>>> 
>>>>> 
>>>>> Done. I have compiled 1.10.0 and 1.10.rc1 with --enable-debug and executed
>>>>> 
>>>>> mpirun --mca rmaps_base_verbose 10 --hetero-nodes --report-bindings 
>>>>> --bind-to core -np 32 ./affinity
>>>>> 
>>>>> In case of 1.10.rc1 I have also added :overload-allowed - output in a 
>>>>> separate file. This option did not make much difference for 1.10.0, so I 
>>>>> did not attach it here.
>>>>> 
>>>>> First thing I noted for 1.10.0 are lines like
>>>>> 
>>>>> [login-0-1.local:03399] [[37945,0],0] GOT 1 CPUS
>>>>> [login-0-1.local:03399] [[37945,0],0] PROC [[37945,1],27] BITMAP
>>>>> [login-0-1.local:03399] [[37945,0],0] PROC [[37945,1],27] ON c1-26 IS NOT 
>>>>> BOUND
>>>>> 
>>>>> with an empty BITMAP.
>>>>> 
>>>>> The SLURM environment is
>>>>> 
>>>>> set | grep SLURM
>>>>> SLURM_JOBID=12714491
>>>>> SLURM_JOB_CPUS_PER_NODE='4,2,5(x2),4,7,5'
>>>>> SLURM_JOB_ID=12714491
>>>>> SLURM_JOB_NODELIST='c1-[2,4,8,13,16,23,26]'
>>>>> SLURM_JOB_NUM_NODES=7
>>>>> SLURM_JOB_PARTITION=normal
>>>>> SLURM_MEM_PER_CPU=2048
>>>>> SLURM_NNODES=7
>>>>> SLURM_NODELIST='c1-[2,4,8,13,16,23,26]'
>>>>> SLURM_NODE_ALIASES='(null)'
>>>>> SLURM_NPROCS=32
>>>>> SLURM_NTASKS=32
>>>>> SLURM_SUBMIT_DIR=/cluster/home/marcink
>>>>> SLURM_SUBMIT_HOST=login-0-1.local
>>>>> SLURM_TASKS_PER_NODE='4,2,5(x2),4,7,5'
>>>>> 
>>>>> I have submitted an interactive job on screen for 120 hours now to work 
>>>>> with one example, and not change it for every post :)
>>>>> 
>>>>> If you need anything else, let me know. I could introduce some 
>>>>> patch/printfs and recompile, if you need it.
>>>>> 
>>>>> Marcin
>>>>> 
>>>>> 
>>>>> 
>>>>> On 10/03/2015 07:17 PM, Ralph Castain wrote:
>>>>>> Rats - just realized I have no way to test this as none of the machines 
>>>>>> I can access are setup for cgroup-based multi-tenant. Is this a debug 
>>>>>> version of OMPI? If not, can you rebuild OMPI with —enable-debug?
>>>>>> 
>>>>>> Then please run it with —mca rmaps_base_verbose 10 and pass along the 
>>>>>> output.
>>>>>> 
>>>>>> Thanks
>>>>>> Ralph
>>>>>> 
>>>>>> 
>>>>>>> On Oct 3, 2015, at 10:09 AM, Ralph Castain < <>r...@open-mpi.org 
>>>>>>> <mailto:r...@open-mpi.org>> wrote:
>>>>>>> 
>>>>>>> What version of slurm is this? I might try to debug it here. I’m not 
>>>>>>> sure where the problem lies just yet.
>>>>>>> 
>>>>>>> 
>>>>>>>> On Oct 3, 2015, at 8:59 AM, marcin.krotkiewski < 
>>>>>>>> <mailto:marcin.krotkiew...@gmail.com>marcin.krotkiew...@gmail.com 
>>>>>>>> <mailto:marcin.krotkiew...@gmail.com>> wrote:
>>>>>>>> 
>>>>>>>> Here is the output of lstopo. In short, (0,16) are core 0, (1,17) - 
>>>>>>>> core 1 etc.
>>>>>>>> 
>>>>>>>> Machine (64GB)
>>>>>>>>   NUMANode L#0 (P#0 32GB)
>>>>>>>>     Socket L#0 + L3 L#0 (20MB)
>>>>>>>>       L2 L#0 (256KB) + L1d L#0 (32KB) + L1i L#0 (32KB) + Core L#0
>>>>>>>>         PU L#0 (P#0)
>>>>>>>>         PU L#1 (P#16)
>>>>>>>>       L2 L#1 (256KB) + L1d L#1 (32KB) + L1i L#1 (32KB) + Core L#1
>>>>>>>>         PU L#2 (P#1)
>>>>>>>>         PU L#3 (P#17)
>>>>>>>>       L2 L#2 (256KB) + L1d L#2 (32KB) + L1i L#2 (32KB) + Core L#2
>>>>>>>>         PU L#4 (P#2)
>>>>>>>>         PU L#5 (P#18)
>>>>>>>>       L2 L#3 (256KB) + L1d L#3 (32KB) + L1i L#3 (32KB) + Core L#3
>>>>>>>>         PU L#6 (P#3)
>>>>>>>>         PU L#7 (P#19)
>>>>>>>>       L2 L#4 (256KB) + L1d L#4 (32KB) + L1i L#4 (32KB) + Core L#4
>>>>>>>>         PU L#8 (P#4)
>>>>>>>>         PU L#9 (P#20)
>>>>>>>>       L2 L#5 (256KB) + L1d L#5 (32KB) + L1i L#5 (32KB) + Core L#5
>>>>>>>>         PU L#10 (P#5)
>>>>>>>>         PU L#11 (P#21)
>>>>>>>>       L2 L#6 (256KB) + L1d L#6 (32KB) + L1i L#6 (32KB) + Core L#6
>>>>>>>>         PU L#12 (P#6)
>>>>>>>>         PU L#13 (P#22)
>>>>>>>>       L2 L#7 (256KB) + L1d L#7 (32KB) + L1i L#7 (32KB) + Core L#7
>>>>>>>>         PU L#14 (P#7)
>>>>>>>>         PU L#15 (P#23)
>>>>>>>>     HostBridge L#0
>>>>>>>>       PCIBridge
>>>>>>>>         PCI 8086:1521
>>>>>>>>           Net L#0 "eth0"
>>>>>>>>         PCI 8086:1521
>>>>>>>>           Net L#1 "eth1"
>>>>>>>>       PCIBridge
>>>>>>>>         PCI 15b3:1003
>>>>>>>>           Net L#2 "ib0"
>>>>>>>>           OpenFabrics L#3 "mlx4_0"
>>>>>>>>       PCIBridge
>>>>>>>>         PCI 102b:0532
>>>>>>>>       PCI 8086:1d02
>>>>>>>>         Block L#4 "sda"
>>>>>>>>   NUMANode L#1 (P#1 32GB) + Socket L#1 + L3 L#1 (20MB)
>>>>>>>>     L2 L#8 (256KB) + L1d L#8 (32KB) + L1i L#8 (32KB) + Core L#8
>>>>>>>>       PU L#16 (P#8)
>>>>>>>>       PU L#17 (P#24)
>>>>>>>>     L2 L#9 (256KB) + L1d L#9 (32KB) + L1i L#9 (32KB) + Core L#9
>>>>>>>>       PU L#18 (P#9)
>>>>>>>>       PU L#19 (P#25)
>>>>>>>>     L2 L#10 (256KB) + L1d L#10 (32KB) + L1i L#10 (32KB) + Core L#10
>>>>>>>>       PU L#20 (P#10)
>>>>>>>>       PU L#21 (P#26)
>>>>>>>>     L2 L#11 (256KB) + L1d L#11 (32KB) + L1i L#11 (32KB) + Core L#11
>>>>>>>>       PU L#22 (P#11)
>>>>>>>>       PU L#23 (P#27)
>>>>>>>>     L2 L#12 (256KB) + L1d L#12 (32KB) + L1i L#12 (32KB) + Core L#12
>>>>>>>>       PU L#24 (P#12)
>>>>>>>>       PU L#25 (P#28)
>>>>>>>>     L2 L#13 (256KB) + L1d L#13 (32KB) + L1i L#13 (32KB) + Core L#13
>>>>>>>>       PU L#26 (P#13)
>>>>>>>>       PU L#27 (P#29)
>>>>>>>>     L2 L#14 (256KB) + L1d L#14 (32KB) + L1i L#14 (32KB) + Core L#14
>>>>>>>>       PU L#28 (P#14)
>>>>>>>>       PU L#29 (P#30)
>>>>>>>>     L2 L#15 (256KB) + L1d L#15 (32KB) + L1i L#15 (32KB) + Core L#15
>>>>>>>>       PU L#30 (P#15)
>>>>>>>>       PU L#31 (P#31)
>>>>>>>> 
>>>>>>>> 
>>>>>>>> 
>>>>>>>> On 10/03/2015 05:46 PM, Ralph Castain wrote:
>>>>>>>>> Maybe I’m just misreading your HT map - that slurm nodelist syntax is 
>>>>>>>>> a new one to me, but they tend to change things around. Could you run 
>>>>>>>>> lstopo on one of those compute nodes and send the output?
>>>>>>>>> 
>>>>>>>>> I’m just suspicious because I’m not seeing a clear pairing of HT 
>>>>>>>>> numbers in your output, but HT numbering is BIOS-specific and I may 
>>>>>>>>> just not be understanding your particular pattern. Our error message 
>>>>>>>>> is clearly indicating that we are seeing individual HTs (and not 
>>>>>>>>> complete cores) assigned, and I don’t know the source of that 
>>>>>>>>> confusion.
>>>>>>>>> 
>>>>>>>>> 
>>>>>>>>>> On Oct 3, 2015, at 8:28 AM, marcin.krotkiewski < 
>>>>>>>>>> <mailto:marcin.krotkiew...@gmail.com>marcin.krotkiew...@gmail.com 
>>>>>>>>>> <mailto:marcin.krotkiew...@gmail.com>> wrote:
>>>>>>>>>> 
>>>>>>>>>> 
>>>>>>>>>> On 10/03/2015 04:38 PM, Ralph Castain wrote:
>>>>>>>>>>> If mpirun isn’t trying to do any binding, then you will of course 
>>>>>>>>>>> get the right mapping as we’ll just inherit whatever we received.
>>>>>>>>>> Yes. I meant that whatever you received (what SLURM gives) is a 
>>>>>>>>>> correct cpu map and assigns _whole_ CPUs, not a single HT to MPI 
>>>>>>>>>> processes. In the case mentioned earlier openmpi should start 6 
>>>>>>>>>> tasks on c1-30. If HT would be treated as separate and independent 
>>>>>>>>>> cores, sched_getaffinity of an MPI process started on c1-30 would 
>>>>>>>>>> return a map with 6 entries only. In my case it returns a map with 
>>>>>>>>>> 12 entries - 2 for each core. So one  process is in fact allocated 
>>>>>>>>>> both HTs, not only one. Is what I'm saying correct?
>>>>>>>>>> 
>>>>>>>>>>> Looking at your output, it’s pretty clear that you are getting 
>>>>>>>>>>> independent HTs assigned and not full cores. 
>>>>>>>>>> How do you mean? Is the above understanding wrong? I would expect 
>>>>>>>>>> that on c1-30 with --bind-to core openmpi should bind to logical 
>>>>>>>>>> cores 0 and 16 (rank 0), 1 and 17 (rank 2) and so on. All those 
>>>>>>>>>> logical cores are available in sched_getaffinity map, and there is 
>>>>>>>>>> twice as many logical cores as there are MPI processes started on 
>>>>>>>>>> the node.
>>>>>>>>>> 
>>>>>>>>>>> My guess is that something in slurm has changed such that it 
>>>>>>>>>>> detects that HT has been enabled, and then begins treating the HTs 
>>>>>>>>>>> as completely independent cpus.
>>>>>>>>>>> 
>>>>>>>>>>> Try changing “-bind-to core” to “-bind-to hwthread  
>>>>>>>>>>> -use-hwthread-cpus” and see if that works
>>>>>>>>>>> 
>>>>>>>>>> I have and the binding is wrong. For example, I got this output
>>>>>>>>>> 
>>>>>>>>>> rank 0 @ compute-1-30.local  0,
>>>>>>>>>> rank 1 @ compute-1-30.local  16,
>>>>>>>>>> 
>>>>>>>>>> Which means that two ranks have been bound to the same physical core 
>>>>>>>>>> (logical cores 0 and 16 are two HTs of the same core). If I use 
>>>>>>>>>> --bind-to core, I get the following correct binding
>>>>>>>>>> 
>>>>>>>>>> rank 0 @ compute-1-30.local  0, 16,
>>>>>>>>>> 
>>>>>>>>>> The problem is many other ranks get bad binding with 'rank XXX is 
>>>>>>>>>> not bound (or bound to all available processors)' warning.
>>>>>>>>>> 
>>>>>>>>>> But I think I was not entirely correct saying that 1.10.1rc1 did not 
>>>>>>>>>> fix things. It still might have improved something, but not 
>>>>>>>>>> everything. Consider this job:
>>>>>>>>>> 
>>>>>>>>>> SLURM_JOB_CPUS_PER_NODE='5,4,6,5(x2),7,5,9,5,7,6'
>>>>>>>>>> SLURM_JOB_NODELIST='c8-[31,34],c9-[30-32,35-36],c10-[31-34]'
>>>>>>>>>> 
>>>>>>>>>> If I run 32 tasks as follows (with 1.10.1rc1)
>>>>>>>>>> 
>>>>>>>>>> mpirun --hetero-nodes --report-bindings --bind-to core -np 32 
>>>>>>>>>> ./affinity
>>>>>>>>>> 
>>>>>>>>>> I get the following error:
>>>>>>>>>> 
>>>>>>>>>> --------------------------------------------------------------------------
>>>>>>>>>> A request was made to bind to that would result in binding more
>>>>>>>>>> processes than cpus on a resource:
>>>>>>>>>> 
>>>>>>>>>>    Bind to:     CORE
>>>>>>>>>>    Node:        c9-31
>>>>>>>>>>    #processes:  2
>>>>>>>>>>    #cpus:       1
>>>>>>>>>> 
>>>>>>>>>> You can override this protection by adding the "overload-allowed"
>>>>>>>>>> option to your binding directive.
>>>>>>>>>> --------------------------------------------------------------------------
>>>>>>>>>> 
>>>>>>>>>> 
>>>>>>>>>> If I now use --bind-to core:overload-allowed, then openmpi starts 
>>>>>>>>>> and _most_ of the threads are bound correctly (i.e., map contains 
>>>>>>>>>> two logical cores in ALL cases), except this case that required the 
>>>>>>>>>> overload flag:
>>>>>>>>>> 
>>>>>>>>>> rank 15 @ compute-9-31.local   1, 17,
>>>>>>>>>> rank 16 @ compute-9-31.local  11, 27,
>>>>>>>>>> rank 17 @ compute-9-31.local   2, 18, 
>>>>>>>>>> rank 18 @ compute-9-31.local  12, 28,
>>>>>>>>>> rank 19 @ compute-9-31.local   1, 17,
>>>>>>>>>> 
>>>>>>>>>> Note pair 1,17 is used twice. The original SLURM delivered map (no 
>>>>>>>>>> binding) on this node is
>>>>>>>>>> 
>>>>>>>>>> rank 15 @ compute-9-31.local  1, 2, 11, 12, 13, 17, 18, 27, 28, 29, 
>>>>>>>>>> rank 16 @ compute-9-31.local  1, 2, 11, 12, 13, 17, 18, 27, 28, 29,
>>>>>>>>>> rank 17 @ compute-9-31.local  1, 2, 11, 12, 13, 17, 18, 27, 28, 29,
>>>>>>>>>> rank 18 @ compute-9-31.local  1, 2, 11, 12, 13, 17, 18, 27, 28, 29,
>>>>>>>>>> rank 19 @ compute-9-31.local  1, 2, 11, 12, 13, 17, 18, 27, 28, 29,
>>>>>>>>>> 
>>>>>>>>>> Why does openmpi use cores (1,17) twice instead of using core 
>>>>>>>>>> (13,29)? Clearly, the original SLURM-delivered map has 5 CPUs 
>>>>>>>>>> included, enough for 5 MPI processes. 
>>>>>>>>>> 
>>>>>>>>>> Cheers,
>>>>>>>>>> 
>>>>>>>>>> Marcin
>>>>>>>>>> 
>>>>>>>>>> 
>>>>>>>>>>> 
>>>>>>>>>>>> On Oct 3, 2015, at 7:12 AM, marcin.krotkiewski < 
>>>>>>>>>>>> <mailto:marcin.krotkiew...@gmail.com>marcin.krotkiew...@gmail.com 
>>>>>>>>>>>> <mailto:marcin.krotkiew...@gmail.com>> wrote:
>>>>>>>>>>>> 
>>>>>>>>>>>> 
>>>>>>>>>>>> On 10/03/2015 01:06 PM, Ralph Castain wrote:
>>>>>>>>>>>>> Thanks Marcin. Looking at this, I’m guessing that Slurm may be 
>>>>>>>>>>>>> treating HTs as “cores” - i.e., as independent cpus. Any chance 
>>>>>>>>>>>>> that is true?
>>>>>>>>>>>> Not to the best of my knowledge, and at least not intentionally. 
>>>>>>>>>>>> SLURM starts as many processes as there are physical cores, not 
>>>>>>>>>>>> threads. To verify this, consider this test case:
>>>> 
>>>> 
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