Hi,
use: --map-by core

regards,
Tobias

On 09/13/2015 09:41 AM, Saliya Ekanayake wrote:
I tried,

--map-by ppr:12:node --slot-list 0,2,4,6,8,10,12,14,16,18,20,22 --bind-to core -np 12

but it complains,

"Conflicting directives for binding policy are causing the policy
to be redefined:

  New policy:   socket
  Prior policy:  CORE

Please check that only one policy is defined.
"

On Sun, Sep 13, 2015 at 2:57 AM, Ralph Castain <r...@open-mpi.org <mailto:r...@open-mpi.org>> wrote:

    Try something like this instead:

    —map-by ppr:12:node —bind-to core —slot-list=0,2,4,6,8,…

    You’ll have to play a bit with the core numbers in the slot-list
    to get the numbering right as I don’t know how your machine
    numbers them, and I can’t guarantee it will work - but it’s worth
    a shot. If it doesn’t, then I may have to add an option for such
    purposes

    Ralph

    On Sep 12, 2015, at 7:39 PM, Saliya Ekanayake <esal...@gmail.com
    <mailto:esal...@gmail.com>> wrote:

    Hi,

    We've a machine as in the following picture. I'd like to run 12
    MPI procs per node each bound to 1 core, but like shown in blue
    dots in the pictures. I can use the following command to run 12
    procs per node, but PE=1 makes all the 12 processes will run in
    just 1 socket. PE=2 will make a process bind to 2 cores, which is
    not what I want.

    --map-by ppr:12:node:PE=1,SPAN

    Thank you,
    Saliya

    <image.png>

-- Saliya Ekanayake
    Ph.D. Candidate | Research Assistant
    School of Informatics and Computing | Digital Science Center
    Indiana University, Bloomington
    Cell 812-391-4914 <tel:812-391-4914>
    http://saliya.org <http://saliya.org/>
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--
Saliya Ekanayake
Ph.D. Candidate | Research Assistant
School of Informatics and Computing | Digital Science Center
Indiana University, Bloomington
Cell 812-391-4914
http://saliya.org


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--
M.Sc. Tobias Klöffel
=======================================================
Interdisciplinary Center for Molecular Materials (ICMM)
and Computer-Chemistry-Center (CCC)
Department Chemie und Pharmazie
Friedrich-Alexander-Universität Erlangen-Nürnberg
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D-91052 Erlangen, Germany

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