Thank you. It worked! On Fri, Mar 13, 2015 at 10:37 AM, Ralph Castain <r...@open-mpi.org> wrote:
> You shouldn’t have to do so > > On Mar 13, 2015, at 7:14 AM, Saliya Ekanayake <esal...@gmail.com> wrote: > > Thanks Ralph. Do I need to specify where to find numactl-devel when > compiling OpenMPI? > > On Thu, Mar 12, 2015 at 7:17 PM, Ralph Castain <r...@open-mpi.org> wrote: > >> You are missing the numactl and numactl-devel packages on that compute >> node, and so we cannot bind the memory to the same location as your proc. >> As the warning indicates, it can impact performance but won't stop you from >> running >> >> >> On Mar 12, 2015, at 12:51 PM, Saliya Ekanayake <esal...@gmail.com> wrote: >> >> Hi, >> >> I am getting the following binding warning and wonder if I am missing >> some library or so >> >> -------------------------------------------------------------------------- >> WARNING: a request was made to bind a process. While the system >> supports binding the process itself, at least one node does NOT >> support binding memory to the process location. >> >> Node: cn19ib >> >> This is a warning only; your job will continue, though performance may >> be degraded. >> -------------------------------------------------------------------------- >> [cn19:09179] MCW rank 0 bound to socket 0[core 0[hwt 0]], socket 0[core >> 1[hwt 0]], socket 0[core 2[hwt 0]], socket 0[core 3[hwt 0]], socket 0[core >> 4[hwt 0]], socket 0[core 5[hwt 0]]: >> [B/B/B/B/B/B][./././././.][./././././.][./././././.] >> >> Thank you, >> Saliya >> >> -- >> Saliya Ekanayake >> Ph.D. Candidate | Research Assistant >> School of Informatics and Computing | Digital Science Center >> Indiana University, Bloomington >> Cell 812-391-4914 >> http://saliya.org >> _______________________________________________ >> users mailing list >> us...@open-mpi.org >> Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users >> Link to this post: >> http://www.open-mpi.org/community/lists/users/2015/03/26454.php >> >> >> >> _______________________________________________ >> users mailing list >> us...@open-mpi.org >> Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users >> Link to this post: >> http://www.open-mpi.org/community/lists/users/2015/03/26458.php >> > > > > -- > Saliya Ekanayake > Ph.D. Candidate | Research Assistant > School of Informatics and Computing | Digital Science Center > Indiana University, Bloomington > Cell 812-391-4914 > http://saliya.org > _______________________________________________ > users mailing list > us...@open-mpi.org > Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users > Link to this post: > http://www.open-mpi.org/community/lists/users/2015/03/26465.php > > > > _______________________________________________ > users mailing list > us...@open-mpi.org > Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users > Link to this post: > http://www.open-mpi.org/community/lists/users/2015/03/26466.php > -- Saliya Ekanayake Ph.D. Candidate | Research Assistant School of Informatics and Computing | Digital Science Center Indiana University, Bloomington Cell 812-391-4914 http://saliya.org
