Hello, thanks for your help. I have tried: ./configure --with-mpi-prefix=/usr FC=ifort CC=icc But i still get the same error. Mind you if I compile it serially, that is ./configure FC=ifort CC=icc It works perfectly fine. We do have MPI installed.. I am using Quantum Espresso code with mpirun. I am attaching the config.log file. I appreciate your help. Regards Elio
From: nickpap...@gmail.com List-Post: users@lists.open-mpi.org Date: Tue, 3 Feb 2015 17:21:51 +0000 To: us...@open-mpi.org Subject: Re: [OMPI users] configuring a code with MPI/OPENMPI First try and correct your compilation by using the intel c-compiler AND the fortran compiler. You should not mix compilers. CC=icc FC=ifortElse the config.log is going to be necessary to debug it further. PS: You could also try and convince your cluster administrator to provide a more recent compilerPPS: Do your cluster not have an MPI installation already present? 2015-02-03 17:13 GMT+00:00 Elio Physics <elio-phys...@live.com>: Dear all, II am trying to configure a code with mpi (for parallel processing) to do some calculations so basically I type: ./configure and I get: configure: error: Fortran compiler does not provide iso_c_binding module. Use a more recent version or a different compiler which means that my GCC 4.1 compiler is too old to build the code (something i do not have control over..It is a cluster of the Uni where I work). so I tried another compiler ifort: ./configure --enable-mpi=yes FC=ifort but now I get another error: ============================================================================== === Multicore architecture support === ============================================================================== checking whether to enable OpenMP support... nochecking whether to build MPI code... yeschecking whether the C compiler supports MPI... nochecking whether the C++ compiler supports MPI... nochecking whether the Fortran Compiler supports MPI... nochecking whether MPI is usable... noconfigure: error: MPI support is broken - please fix your config parameters and/or MPI installation Agaiin, I tried ti give a path for the mpi compiler: ./configure --enable-mpi --with-mpi-prefix=/usr FC=ifort WHICH APPARENTLY SOLVED THE PREVIOUS ERROR: ============================================================================== === Multicore architecture startup === ============================================================================== configure: Initializing MPI supportconfigure: looking for MPI in /usrchecking for a MPI C compiler... /usr/bin/mpiccchecking for a MPI C++ compiler... /usr/bin/mpicxxchecking for a MPI Fortran compiler... /usr/bin/mpif90configure: creating wrapper for MPI Fortran compilerconfigure: GPU support disabled from command-line But stranegly enough got me back to the furst error although I am using ifort!! checking whether the Fortran compiler provides the iso_c_binding module... configure: error: Fortran compiler does not provide iso_c_binding module. Use a more recent version or a different compiler so what is going on?? please can anyone help me on this..Thank youu ElioUniversity of RondoniaBrazil _______________________________________________ users mailing list us...@open-mpi.org Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users Link to this post: http://www.open-mpi.org/community/lists/users/2015/02/26268.php -- Kind regards Nick _______________________________________________ users mailing list us...@open-mpi.org Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users Link to this post: http://www.open-mpi.org/community/lists/users/2015/02/26270.php
This file contains any messages produced by compilers while running configure, to aid debugging if configure makes a mistake. It was created by ABINIT configure 7.10.2, which was generated by GNU Autoconf 2.63. Invocation command line was $ ./configure --enable-mpi=yes --with-mpi-prefix=/usr FC=ifort CC=icc ## --------- ## ## Platform. ## ## --------- ## hostname = veredas0 uname -m = x86_64 uname -r = 2.6.18-128.el5 uname -s = Linux uname -v = #1 SMP Wed Dec 17 11:41:38 EST 2008 /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /opt/scilibs/FFTW/fftw-3.2.1_Bull.9005/bin PATH: /home_cluster/fis718/eliemouj/XCrySDen-1.5.21-bin-semishared PATH: /home_cluster/fis718/eliemouj/XCrySDen-1.5.21-bin-semishared PATH: /opt/sci/siesta//intel.mkl.impi/bin PATH: /usr/lib64/qt-3.3/bin PATH: /usr/kerberos/bin PATH: /opt/intel/Compiler/11.1/069/bin/intel64 PATH: /opt/intel/Compiler/11.1/069/bin/intel64 PATH: /opt/cuda//bin PATH: /opt/sci/cpmd/3.15.1/1.el5.veredas.ifort.11.1.impi.4.0.0.mkl.10.2.mkl/bin PATH: /usr/local/bin PATH: /bin PATH: /usr/bin PATH: /usr/pbs/bin PATH: //usr/local/go/bin PATH: /opt/dell/srvadmin/bin PATH: /opt/thinlinc/bin PATH: /home_cluster/fis718/eliemouj/XCrySDen-1.5.21-bin-semishared/scripts PATH: /home_cluster/fis718/eliemouj/XCrySDen-1.5.21-bin-semishared/util PATH: /home_cluster/fis718/eliemouj/lammps/moltemplate_2012-9-30/src PATH: /home_cluster/fis718/eliemouj/XCrySDen-1.5.21-bin-semishared/scripts PATH: /home_cluster/fis718/eliemouj/XCrySDen-1.5.21-bin-semishared/util PATH: /home_cluster/fis718/eliemouj/bin PATH: /home_cluster/fis718/eliemouj/script_submit ## ----------- ## ## Core tests. ## ## ----------- ## configure:2799: checking build system type configure:2817: result: x86_64-unknown-linux-gnu configure:2839: checking host system type configure:2854: result: x86_64-unknown-linux-gnu configure:2876: checking target system type configure:2891: result: x86_64-unknown-linux-gnu configure:2937: checking for a BSD-compatible install configure:3005: result: /usr/bin/install -c configure:3016: checking whether build environment is sane configure:3076: result: yes configure:3217: checking for a thread-safe mkdir -p configure:3256: result: /bin/mkdir -p configure:3269: checking for gawk configure:3285: found /bin/gawk configure:3296: result: gawk configure:3307: checking whether make sets $(MAKE) configure:3329: result: yes configure:3406: checking how to create a ustar tar archive configure:3419: tar --version tar (GNU tar) 1.15.1 configure:3422: $? = 0 configure:3462: tardir=conftest.dir && eval tar --format=ustar -chf - "$tardir" >conftest.tar configure:3465: $? = 0 configure:3469: tar -xf - <conftest.tar configure:3472: $? = 0 configure:3485: result: gnutar configure:3890: checking whether make sets $(MAKE) configure:3912: result: yes configure:3935: checking for a BSD-compatible install configure:4003: result: /usr/bin/install -c configure:4014: checking whether ln -s works configure:4018: result: yes configure:4025: checking for a sed that does not truncate output configure:4091: result: /bin/sed configure:4100: checking for gawk configure:4127: result: gawk configure:4138: checking for grep that handles long lines and -e configure:4198: result: /bin/grep configure:4205: checking for egrep configure:4269: result: /bin/grep -E configure:4277: checking for a thread-safe mkdir -p configure:4316: result: /bin/mkdir -p configure:4333: checking for realpath,readlink configure:4363: result: no configure:5344: not loading options (no config file available) configure:7296: ABINIT version 7.10.2 configure:7306: M4 010413 - Autoconf 026300 - Automake 011101 - Libtool 020206 configure:7317: reporting user interface changes: configure:7402: checking consistency of library-related options configure:7433: |---> all OK configure:7436: configure:7445: checking consistency of experimental options configure:7460: |---> all OK configure:7463: configure:7472: checking consistency of maintainer options configure:7487: |---> all OK configure:7490: configure:7499: parsing command-line options configure:8710: Initializing MPI support configure:8714: looking for MPI in /usr configure:8746: checking for a MPI C compiler configure:8756: result: /usr/bin/mpicc configure:8760: checking for a MPI C++ compiler configure:8773: result: /usr/bin/mpicxx configure:8777: checking for a MPI Fortran compiler configure:8787: result: /usr/bin/mpif90 configure:8846: creating wrapper for MPI C compiler configure:8896: creating wrapper for MPI Fortran compiler configure:9232: GPU support disabled from command-line configure:9277: checking for sh configure:9295: found /bin/sh configure:9308: result: /bin/sh configure:9318: checking for mv configure:9336: found /bin/mv configure:9349: result: /bin/mv configure:9359: checking for perl configure:9377: found /usr/bin/perl configure:9390: result: /usr/bin/perl configure:9400: checking for rm configure:9418: found /bin/rm configure:9431: result: /bin/rm configure:9444: checking for patch configure:9460: found /usr/bin/patch configure:9471: result: patch configure:9486: checking for tar configure:9502: found /bin/tar configure:9513: result: tar configure:9881: checking for gcc configure:9908: result: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc configure:10140: checking for C compiler version configure:10148: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc --version >&5 gcc (GCC) 4.1.2 20080704 (Red Hat 4.1.2-54) Copyright (C) 2006 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:10152: $? = 0 configure:10159: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -v >&5 mpicc for MPICH2 version 1.2.1 Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-libgcj-multifile --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --disable-plugin --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20080704 (Red Hat 4.1.2-54) configure:10163: $? = 0 configure:10170: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -V >&5 gcc: '-V' must come at the start of the command line configure:10174: $? = 1 configure:10197: checking for C compiler default output file name configure:10219: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc conftest.c >&5 configure:10223: $? = 0 configure:10261: result: a.out configure:10280: checking whether the C compiler works configure:10290: ./a.out configure:10294: $? = 0 configure:10313: result: yes configure:10320: checking whether we are cross compiling configure:10322: result: no configure:10325: checking for suffix of executables configure:10332: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest conftest.c >&5 configure:10336: $? = 0 configure:10362: result: configure:10368: checking for suffix of object files configure:10394: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c conftest.c >&5 configure:10398: $? = 0 configure:10423: result: o configure:10427: checking whether we are using the GNU C compiler configure:10456: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c conftest.c >&5 configure:10463: $? = 0 configure:10480: result: yes configure:10489: checking whether /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc accepts -g configure:10519: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -g conftest.c >&5 configure:10526: $? = 0 configure:10627: result: yes configure:10644: checking for /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc option to accept ISO C89 configure:10718: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -g -O2 conftest.c >&5 configure:10725: $? = 0 configure:10748: result: none needed configure:10777: checking for style of include used by make configure:10805: result: GNU configure:10830: checking dependency style of /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc configure:10940: result: gcc3 configure:11016: checking how to run the C preprocessor configure:11056: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E conftest.c configure:11063: $? = 0 configure:11094: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E conftest.c conftest.c:17:28: error: ac_nonexistent.h: No such file or directory configure:11101: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | /* end confdefs.h. */ | #include <ac_nonexistent.h> configure:11134: result: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E configure:11163: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E conftest.c configure:11170: $? = 0 configure:11201: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E conftest.c conftest.c:17:28: error: ac_nonexistent.h: No such file or directory configure:11208: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | /* end confdefs.h. */ | #include <ac_nonexistent.h> configure:11261: checking which type of compiler we have configure:11496: result: gnu 4.1 configure:11511: checking for ANSI C header files configure:11541: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c conftest.c >&5 configure:11548: $? = 0 configure:11647: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest conftest.c >&5 configure:11651: $? = 0 configure:11657: ./conftest configure:11661: $? = 0 configure:11679: result: yes configure:11703: checking for sys/types.h configure:11724: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c conftest.c >&5 configure:11731: $? = 0 configure:11748: result: yes configure:11703: checking for sys/stat.h configure:11724: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c conftest.c >&5 configure:11731: $? = 0 configure:11748: result: yes configure:11703: checking for stdlib.h configure:11724: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c conftest.c >&5 configure:11731: $? = 0 configure:11748: result: yes configure:11703: checking for string.h configure:11724: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c conftest.c >&5 configure:11731: $? = 0 configure:11748: result: yes configure:11703: checking for memory.h configure:11724: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c conftest.c >&5 configure:11731: $? = 0 configure:11748: result: yes configure:11703: checking for strings.h configure:11724: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c conftest.c >&5 configure:11731: $? = 0 configure:11748: result: yes configure:11703: checking for inttypes.h configure:11724: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c conftest.c >&5 configure:11731: $? = 0 configure:11748: result: yes configure:11703: checking for stdint.h configure:11724: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c conftest.c >&5 configure:11731: $? = 0 configure:11748: result: yes configure:11703: checking for unistd.h configure:11724: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c conftest.c >&5 configure:11731: $? = 0 configure:11748: result: yes configure:11763: checking whether byte ordering is bigendian configure:11788: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c conftest.c >&5 conftest.c:29: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'a' configure:11795: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | /* end confdefs.h. */ | #ifndef __APPLE_CC__ | not a universal capable compiler | #endif | typedef int dummy; | configure:11845: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c conftest.c >&5 configure:11852: $? = 0 configure:11884: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c conftest.c >&5 conftest.c: In function 'main': conftest.c:35: error: 'not' undeclared (first use in this function) conftest.c:35: error: (Each undeclared identifier is reported only once conftest.c:35: error: for each function it appears in.) conftest.c:35: error: expected ';' before 'big' configure:11891: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | /* end confdefs.h. */ | #include <sys/types.h> | #include <sys/param.h> | | int | main () | { | #if BYTE_ORDER != BIG_ENDIAN | not big endian | #endif | | ; | return 0; | } configure:12143: result: no configure:12589: checking for C++ compiler version configure:12597: /usr/bin/mpicxx --version >&5 c++ (GCC) 4.1.2 20080704 (Red Hat 4.1.2-54) Copyright (C) 2006 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. configure:12601: $? = 0 configure:12608: /usr/bin/mpicxx -v >&5 mpicxx for MPICH2 version 1.2.1 Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-libgcj-multifile --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --disable-plugin --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20080704 (Red Hat 4.1.2-54) configure:12612: $? = 0 configure:12619: /usr/bin/mpicxx -V >&5 c++: '-V' must come at the start of the command line configure:12623: $? = 1 configure:12626: checking whether we are using the GNU C++ compiler configure:12655: /usr/bin/mpicxx -c conftest.cpp >&5 configure:12662: $? = 0 configure:12679: result: yes configure:12688: checking whether /usr/bin/mpicxx accepts -g configure:12718: /usr/bin/mpicxx -c -g conftest.cpp >&5 configure:12725: $? = 0 configure:12826: result: yes configure:12851: checking dependency style of /usr/bin/mpicxx configure:12961: result: gcc3 configure:12990: checking which type of C++ compiler we have configure:13225: result: gnu 4.1 configure:13651: checking for Fortran compiler version configure:13659: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc --version >&5 GNU Fortran (GCC) 4.1.2 20080704 (Red Hat 4.1.2-54) Copyright (C) 2007 Free Software Foundation, Inc. GNU Fortran comes with NO WARRANTY, to the extent permitted by law. You may redistribute copies of GNU Fortran under the terms of the GNU General Public License. For more information about these matters, see the file named COPYING configure:13663: $? = 0 configure:13670: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -v >&5 mpif90 for MPICH2 version 1.2.1 Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-libgcj-multifile --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --disable-plugin --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20080704 (Red Hat 4.1.2-54) configure:13674: $? = 0 configure:13681: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -V >&5 gfortran: '-V' must come at the start of the command line configure:13685: $? = 1 configure:13693: checking whether we are using the GNU Fortran compiler configure:13712: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -c conftest.F >&5 configure:13719: $? = 0 configure:13736: result: yes configure:13742: checking whether /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc accepts -g configure:13759: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -c -g conftest.f >&5 configure:13766: $? = 0 configure:13782: result: yes configure:13878: checking which type of Fortran compiler we have configure:14267: result: gnu 4.1 configure:14280: checking fortran 90 modules extension configure:14313: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -c -g -O2 conftest.f >&5 configure:14320: $? = 0 configure:14351: result: mod configure:14365: checking for Fortran flag to compile .F90 files configure:14387: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -c -g -O2 conftest.F90 >&5 configure:14394: $? = 0 configure:14413: result: none configure:14449: determining Fortran module case configure:14469: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -c -g -O2 conftest.F90 >&5 configure:14476: $? = 0 configure:14511: checking whether Fortran modules are upper-case configure:14513: result: no configure:14531: checking how to get verbose linking output from /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc configure:14547: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -c conftest.F90 >&5 configure:14554: $? = 0 configure:14576: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -o conftest -v conftest.F90 mpif90 for MPICH2 version 1.2.1 Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-libgcj-multifile --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --disable-plugin --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20080704 (Red Hat 4.1.2-54) /usr/libexec/gcc/x86_64-redhat-linux/4.1.2/cc1 -E -lang-fortran -traditional-cpp -D_LANGUAGE_FORTRAN -quiet -v -I/usr/include/mpich2-x86_64 -I/usr/include/mpich2-x86_64 conftest.F90 -m64 -mtune=generic -fPIC -O2 -o /tmp/cczMd1T2.f95 ignoring nonexistent directory "/usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../x86_64-redhat-linux/include" ignoring duplicate directory "/usr/include/mpich2-x86_64" #include "..." search starts here: #include <...> search starts here: /usr/include/mpich2-x86_64 /usr/local/include /usr/lib/gcc/x86_64-redhat-linux/4.1.2/include /usr/include End of search list. /usr/libexec/gcc/x86_64-redhat-linux/4.1.2/f951 /tmp/cczMd1T2.f95 -ffree-form -quiet -dumpbase conftest.F90 -m64 -mtune=generic -auxbase conftest -O2 -version -fPIC -I/usr/include/mpich2-x86_64 -I/usr/include/mpich2-x86_64 -fpreprocessed -I /usr/lib/gcc/x86_64-redhat-linux/4.1.2/finclude -o /tmp/cc2GbLlY.s GNU F95 version 4.1.2 20080704 (Red Hat 4.1.2-54) (x86_64-redhat-linux) compiled by GNU C version 4.1.2 20080704 (Red Hat 4.1.2-54). GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -V -Qy --64 -o /tmp/ccLtFhyU.o /tmp/cc2GbLlY.s GNU assembler version 2.17.50.0.6-12 (x86_64-redhat-linux) using BFD version 2.17.50.0.6-12 20061020 /usr/libexec/gcc/x86_64-redhat-linux/4.1.2/collect2 --eh-frame-hdr -m elf_x86_64 --hash-style=gnu -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.1.2/crtbegin.o -L/usr/lib64/mpich2/lib -L/usr/lib64/mpich2/lib -L/opt/intel/Compiler/11.1/069/lib/intel64 -L/opt/intel/Compiler/11.1/069/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -z noexecstack /tmp/ccLtFhyU.o -lmpichf90 -rpath /usr/lib64/mpich2/lib -lmpichf90 -lmpich -lopa -lpthread -lrt -lgfortranbegin -lgfortran -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/4.1.2/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/crtn.o configure:14645: result: -v configure:14647: checking for Fortran libraries of /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc configure:14670: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -o conftest -v conftest.F90 mpif90 for MPICH2 version 1.2.1 Using built-in specs. Target: x86_64-redhat-linux Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-libgcj-multifile --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --disable-plugin --with-java-home=/usr/lib/jvm/java-1.4.2-gcj-1.4.2.0/jre --with-cpu=generic --host=x86_64-redhat-linux Thread model: posix gcc version 4.1.2 20080704 (Red Hat 4.1.2-54) /usr/libexec/gcc/x86_64-redhat-linux/4.1.2/cc1 -E -lang-fortran -traditional-cpp -D_LANGUAGE_FORTRAN -quiet -v -I/usr/include/mpich2-x86_64 -I/usr/include/mpich2-x86_64 conftest.F90 -m64 -mtune=generic -fPIC -O2 -o /tmp/cc6rk9aa.f95 ignoring nonexistent directory "/usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../x86_64-redhat-linux/include" ignoring duplicate directory "/usr/include/mpich2-x86_64" #include "..." search starts here: #include <...> search starts here: /usr/include/mpich2-x86_64 /usr/local/include /usr/lib/gcc/x86_64-redhat-linux/4.1.2/include /usr/include End of search list. /usr/libexec/gcc/x86_64-redhat-linux/4.1.2/f951 /tmp/cc6rk9aa.f95 -ffree-form -quiet -dumpbase conftest.F90 -m64 -mtune=generic -auxbase conftest -O2 -version -fPIC -I/usr/include/mpich2-x86_64 -I/usr/include/mpich2-x86_64 -fpreprocessed -I /usr/lib/gcc/x86_64-redhat-linux/4.1.2/finclude -o /tmp/cco9FCcd.s GNU F95 version 4.1.2 20080704 (Red Hat 4.1.2-54) (x86_64-redhat-linux) compiled by GNU C version 4.1.2 20080704 (Red Hat 4.1.2-54). GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072 as -V -Qy --64 -o /tmp/cceyLkhg.o /tmp/cco9FCcd.s GNU assembler version 2.17.50.0.6-12 (x86_64-redhat-linux) using BFD version 2.17.50.0.6-12 20061020 /usr/libexec/gcc/x86_64-redhat-linux/4.1.2/collect2 --eh-frame-hdr -m elf_x86_64 --hash-style=gnu -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/crt1.o /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/crti.o /usr/lib/gcc/x86_64-redhat-linux/4.1.2/crtbegin.o -L/usr/lib64/mpich2/lib -L/usr/lib64/mpich2/lib -L/opt/intel/Compiler/11.1/069/lib/intel64 -L/opt/intel/Compiler/11.1/069/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -z noexecstack /tmp/cceyLkhg.o -lmpichf90 -rpath /usr/lib64/mpich2/lib -lmpichf90 -lmpich -lopa -lpthread -lrt -lgfortranbegin -lgfortran -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-redhat-linux/4.1.2/crtend.o /usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64/crtn.o configure:14847: result: -L/usr/lib64/mpich2/lib -L/opt/intel/Compiler/11.1/069/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -lmpichf90 -lmpich -lopa -lpthread -lrt -lgfortranbegin -lgfortran -lm configure:14863: checking for dummy main to link with Fortran libraries configure:14907: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest conftest.c -L/usr/lib64/mpich2/lib -L/opt/intel/Compiler/11.1/069/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -lmpichf90 -lmpich -lopa -lpthread -lrt -lgfortranbegin -lgfortran -lm >&5 configure:14914: $? = 0 configure:15002: result: none configure:15041: checking for Fortran name-mangling scheme configure:15060: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -c conftest.F90 >&5 configure:15067: $? = 0 configure:15122: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest conftest.c cfortran_test.o -L/usr/lib64/mpich2/lib -L/opt/intel/Compiler/11.1/069/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -lmpichf90 -lmpich -lopa -lpthread -lrt -lgfortranbegin -lgfortran -lm >&5 /tmp/ccsDWiPE.o: In function `main': conftest.c:(.text+0x7): undefined reference to `foobar' collect2: ld returned 1 exit status configure:15129: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | /* end confdefs.h. */ | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char foobar (); | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return foobar (); | ; | return 0; | } configure:15122: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest conftest.c cfortran_test.o -L/usr/lib64/mpich2/lib -L/opt/intel/Compiler/11.1/069/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -lmpichf90 -lmpich -lopa -lpthread -lrt -lgfortranbegin -lgfortran -lm >&5 configure:15129: $? = 0 configure:15211: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest conftest.c cfortran_test.o -L/usr/lib64/mpich2/lib -L/opt/intel/Compiler/11.1/069/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -lmpichf90 -lmpich -lopa -lpthread -lrt -lgfortranbegin -lgfortran -lm >&5 configure:15218: $? = 0 configure:15281: result: lower case, underscore, no extra underscore configure:15424: checking for python configure:15440: found /usr/bin/python configure:15451: result: python configure:15464: checking for Python CPPFLAGS configure:15479: result: -I/usr/include/python2.4 -I/usr/lib64/python2.4/site-packages/numpy/core/include configure:15488: checking for bzr configure:15518: result: no configure:15543: checking Python.h usability configure:15560: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -I/usr/include/python2.4 -I/usr/lib64/python2.4/site-packages/numpy/core/include conftest.c >&5 configure:15567: $? = 0 configure:15581: result: yes configure:15585: checking Python.h presence configure:15600: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E -I/usr/include/python2.4 -I/usr/lib64/python2.4/site-packages/numpy/core/include conftest.c configure:15607: $? = 0 configure:15621: result: yes configure:15654: checking for Python.h configure:15661: result: yes configure:15676: checking for numpy/arrayobject.h configure:15718: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -I/usr/include/python2.4 -I/usr/lib64/python2.4/site-packages/numpy/core/include conftest.c >&5 configure:15725: $? = 0 configure:15752: result: yes configure:16147: checking for ar configure:16163: found /usr/bin/ar configure:16174: result: ar configure:16235: checking for ranlib configure:16251: found /usr/bin/ranlib configure:16262: result: ranlib configure:16332: checking for cpp configure:16348: found /usr/bin/cpp configure:16359: result: cpp configure:16418: checking for a true C preprocessor configure:16424: result: cpp configure:16471: checking which cpp hints to apply configure:16500: result: default/default/default configure:16509: checking which cc hints to apply configure:16570: result: gnu/default/default configure:16581: checking which xpp hints to apply configure:16585: result: none/none/none configure:16594: checking which cxx hints to apply configure:16647: result: gnu/default/default configure:16658: checking which fpp hints to apply configure:16676: result: default/default/default configure:16685: checking which fc hints to apply configure:16898: result: gnu/default/default configure:16909: checking which ar hints to apply configure:16927: result: none/none/none configure:16945: checking which Fortran preprocessor to use configure:16947: result: configure:16949: checking which Fortran preprocessor flags to apply configure:16951: result: configure:16975: checking whether to wrap Fortran compiler calls configure:16977: result: no configure:17019: checking debugging status configure:17042: result: enabled (profile mode: basic) configure:17063: setting C debug flags to '-g' configure:17071: setting C++ debug flags to '-g' configure:17079: setting Fortran debug flags to '-g' configure:17085: checking whether to activate debug mode in source files configure:17099: result: no configure:17102: checking whether to activate debug verbosity in source files configure:17114: result: no configure:17126: checking which cc debug flags to apply configure:17187: result: gnu/default/default configure:17201: checking which cxx debug flags to apply configure:17205: result: none/none/none configure:17219: checking which fc debug flags to apply configure:17611: result: gnu/default/default configure:17631: checking whether to activate design-by-contract debugging configure:17642: result: no configure:17687: checking optimization status configure:17710: result: enabled (profile mode: standard) configure:17735: checking which cc optimizations to apply configure:18153: result: gnu/default/default configure:18167: checking which cxx optimizations to apply configure:18528: result: gnu/default/default configure:18542: checking which fc optimizations to apply configure:19412: result: gnu/default/default configure:19426: checking whether to apply per-directory optimizations configure:19432: result: yes configure:20951: checking for a 64-bit architecture configure:20953: result: yes configure:20955: checking whether to use 64-bit flags configure:20957: result: no configure:20959: checking for user-defined 64-bit flags configure:20961: result: configure:21159: static builds may be performed configure:21220: checking stddef.h usability configure:21237: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:21244: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | #include <stddef.h> configure:21258: result: no configure:21262: checking stddef.h presence configure:21277: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E conftest.c configure:21284: $? = 0 configure:21298: result: yes configure:21311: WARNING: stddef.h: present but cannot be compiled configure:21313: WARNING: stddef.h: check for missing prerequisite headers? configure:21315: WARNING: stddef.h: see the Autoconf documentation configure:21317: WARNING: stddef.h: section "Present But Cannot Be Compiled" configure:21319: WARNING: stddef.h: proceeding with the preprocessor's result configure:21321: WARNING: stddef.h: in the future, the compiler will take precedence configure:21331: checking for stddef.h configure:21340: result: yes configure:21220: checking stdarg.h usability configure:21237: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:21244: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | #include <stdarg.h> configure:21258: result: no configure:21262: checking stdarg.h presence configure:21277: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E conftest.c configure:21284: $? = 0 configure:21298: result: yes configure:21311: WARNING: stdarg.h: present but cannot be compiled configure:21313: WARNING: stdarg.h: check for missing prerequisite headers? configure:21315: WARNING: stdarg.h: see the Autoconf documentation configure:21317: WARNING: stdarg.h: section "Present But Cannot Be Compiled" configure:21319: WARNING: stdarg.h: proceeding with the preprocessor's result configure:21321: WARNING: stdarg.h: in the future, the compiler will take precedence configure:21331: checking for stdarg.h configure:21340: result: yes configure:21373: checking stdio.h usability configure:21390: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:21397: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | #include <stdio.h> configure:21411: result: no configure:21415: checking stdio.h presence configure:21430: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E conftest.c configure:21437: $? = 0 configure:21451: result: yes configure:21464: WARNING: stdio.h: present but cannot be compiled configure:21466: WARNING: stdio.h: check for missing prerequisite headers? configure:21468: WARNING: stdio.h: see the Autoconf documentation configure:21470: WARNING: stdio.h: section "Present But Cannot Be Compiled" configure:21472: WARNING: stdio.h: proceeding with the preprocessor's result configure:21474: WARNING: stdio.h: in the future, the compiler will take precedence configure:21484: checking for stdio.h configure:21493: result: yes configure:21373: checking math.h usability configure:21390: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:21397: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | #include <math.h> configure:21411: result: no configure:21415: checking math.h presence configure:21430: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E conftest.c configure:21437: $? = 0 configure:21451: result: yes configure:21464: WARNING: math.h: present but cannot be compiled configure:21466: WARNING: math.h: check for missing prerequisite headers? configure:21468: WARNING: math.h: see the Autoconf documentation configure:21470: WARNING: math.h: section "Present But Cannot Be Compiled" configure:21472: WARNING: math.h: proceeding with the preprocessor's result configure:21474: WARNING: math.h: in the future, the compiler will take precedence configure:21484: checking for math.h configure:21493: result: yes configure:21373: checking termios.h usability configure:21390: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:21397: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | #include <termios.h> configure:21411: result: no configure:21415: checking termios.h presence configure:21430: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E conftest.c configure:21437: $? = 0 configure:21451: result: yes configure:21464: WARNING: termios.h: present but cannot be compiled configure:21466: WARNING: termios.h: check for missing prerequisite headers? configure:21468: WARNING: termios.h: see the Autoconf documentation configure:21470: WARNING: termios.h: section "Present But Cannot Be Compiled" configure:21472: WARNING: termios.h: proceeding with the preprocessor's result configure:21474: WARNING: termios.h: in the future, the compiler will take precedence configure:21484: checking for termios.h configure:21493: result: yes configure:21524: checking errno.h usability configure:21541: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:21548: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | #include <errno.h> configure:21562: result: no configure:21566: checking errno.h presence configure:21581: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E conftest.c configure:21588: $? = 0 configure:21602: result: yes configure:21615: WARNING: errno.h: present but cannot be compiled configure:21617: WARNING: errno.h: check for missing prerequisite headers? configure:21619: WARNING: errno.h: see the Autoconf documentation configure:21621: WARNING: errno.h: section "Present But Cannot Be Compiled" configure:21623: WARNING: errno.h: proceeding with the preprocessor's result configure:21625: WARNING: errno.h: in the future, the compiler will take precedence configure:21635: checking for errno.h configure:21644: result: yes configure:21676: checking malloc.h usability configure:21693: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:21700: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | #include <malloc.h> configure:21714: result: no configure:21718: checking malloc.h presence configure:21733: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E conftest.c configure:21740: $? = 0 configure:21754: result: yes configure:21767: WARNING: malloc.h: present but cannot be compiled configure:21769: WARNING: malloc.h: check for missing prerequisite headers? configure:21771: WARNING: malloc.h: see the Autoconf documentation configure:21773: WARNING: malloc.h: section "Present But Cannot Be Compiled" configure:21775: WARNING: malloc.h: proceeding with the preprocessor's result configure:21777: WARNING: malloc.h: in the future, the compiler will take precedence configure:21787: checking for malloc.h configure:21796: result: yes configure:21676: checking sys/malloc.h usability configure:21693: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:21700: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | #include <sys/malloc.h> configure:21714: result: no configure:21718: checking sys/malloc.h presence configure:21733: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E conftest.c conftest.c:42:24: error: sys/malloc.h: No such file or directory configure:21740: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | /* end confdefs.h. */ | #include <sys/malloc.h> configure:21754: result: no configure:21787: checking for sys/malloc.h configure:21796: result: no configure:21827: checking mcheck.h usability configure:21844: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:21851: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | #include <mcheck.h> configure:21865: result: no configure:21869: checking mcheck.h presence configure:21884: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E conftest.c configure:21891: $? = 0 configure:21905: result: yes configure:21918: WARNING: mcheck.h: present but cannot be compiled configure:21920: WARNING: mcheck.h: check for missing prerequisite headers? configure:21922: WARNING: mcheck.h: see the Autoconf documentation configure:21924: WARNING: mcheck.h: section "Present But Cannot Be Compiled" configure:21926: WARNING: mcheck.h: proceeding with the preprocessor's result configure:21928: WARNING: mcheck.h: in the future, the compiler will take precedence configure:21938: checking for mcheck.h configure:21947: result: yes configure:21978: checking sys/time.h usability configure:21995: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:22002: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | #include <sys/time.h> configure:22016: result: no configure:22020: checking sys/time.h presence configure:22035: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E conftest.c configure:22042: $? = 0 configure:22056: result: yes configure:22069: WARNING: sys/time.h: present but cannot be compiled configure:22071: WARNING: sys/time.h: check for missing prerequisite headers? configure:22073: WARNING: sys/time.h: see the Autoconf documentation configure:22075: WARNING: sys/time.h: section "Present But Cannot Be Compiled" configure:22077: WARNING: sys/time.h: proceeding with the preprocessor's result configure:22079: WARNING: sys/time.h: in the future, the compiler will take precedence configure:22089: checking for sys/time.h configure:22098: result: yes configure:22129: checking sys/resource.h usability configure:22146: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:22153: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | #include <sys/resource.h> configure:22167: result: no configure:22171: checking sys/resource.h presence configure:22186: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E conftest.c configure:22193: $? = 0 configure:22207: result: yes configure:22220: WARNING: sys/resource.h: present but cannot be compiled configure:22222: WARNING: sys/resource.h: check for missing prerequisite headers? configure:22224: WARNING: sys/resource.h: see the Autoconf documentation configure:22226: WARNING: sys/resource.h: section "Present But Cannot Be Compiled" configure:22228: WARNING: sys/resource.h: proceeding with the preprocessor's result configure:22230: WARNING: sys/resource.h: in the future, the compiler will take precedence configure:22240: checking for sys/resource.h configure:22249: result: yes configure:22272: checking for abort configure:22336: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:22343: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | /* end confdefs.h. */ | /* Define abort to an innocuous variant, in case <limits.h> declares abort. | For example, HP-UX 11i <limits.h> declares gettimeofday. */ | #define abort innocuous_abort | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char abort (); below. | Prefer <limits.h> to <assert.h> if __STDC__ is defined, since | <limits.h> exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include <limits.h> | #else | # include <assert.h> | #endif | | #undef abort | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char abort (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_abort || defined __stub___abort | choke me | #endif | | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return abort (); | ; | return 0; | } configure:22365: result: no configure:22381: checking for mallinfo configure:22445: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:22452: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | /* end confdefs.h. */ | /* Define mallinfo to an innocuous variant, in case <limits.h> declares mallinfo. | For example, HP-UX 11i <limits.h> declares gettimeofday. */ | #define mallinfo innocuous_mallinfo | | /* System header to define __stub macros and hopefully few prototypes, | which can conflict with char mallinfo (); below. | Prefer <limits.h> to <assert.h> if __STDC__ is defined, since | <limits.h> exists even on freestanding compilers. */ | | #ifdef __STDC__ | # include <limits.h> | #else | # include <assert.h> | #endif | | #undef mallinfo | | /* Override any GCC internal prototype to avoid an error. | Use char because int might match the return type of a GCC | builtin and then its argument prototype would still apply. */ | #ifdef __cplusplus | extern "C" | #endif | char mallinfo (); | /* The GNU C library defines this for functions which it implements | to always fail with ENOSYS. Some functions are actually named | something starting with __ and the normal name is an alias. */ | #if defined __stub_mallinfo || defined __stub___mallinfo | choke me | #endif | | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | return mallinfo (); | ; | return 0; | } configure:22474: result: no configure:22494: checking size of char configure:22847: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:22851: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | static long int longval () { return (long int) (sizeof (char)); } | static unsigned long int ulongval () { return (long int) (sizeof (char)); } | #include <stdio.h> | #include <stdlib.h> | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | FILE *f = fopen ("conftest.val", "w"); | if (! f) | return 1; | if (((long int) (sizeof (char))) < 0) | { | long int i = longval (); | if (i != ((long int) (sizeof (char)))) | return 1; | fprintf (f, "%ld", i); | } | else | { | unsigned long int i = ulongval (); | if (i != ((long int) (sizeof (char)))) | return 1; | fprintf (f, "%lu", i); | } | /* Do not output a trailing newline, as this causes \r\n confusion | on some platforms. */ | return ferror (f) || fclose (f) != 0; | | ; | return 0; | } configure:22887: result: 0 configure:22901: checking size of short configure:23254: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:23258: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define SIZEOF_CHAR 0 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | static long int longval () { return (long int) (sizeof (short)); } | static unsigned long int ulongval () { return (long int) (sizeof (short)); } | #include <stdio.h> | #include <stdlib.h> | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | FILE *f = fopen ("conftest.val", "w"); | if (! f) | return 1; | if (((long int) (sizeof (short))) < 0) | { | long int i = longval (); | if (i != ((long int) (sizeof (short)))) | return 1; | fprintf (f, "%ld", i); | } | else | { | unsigned long int i = ulongval (); | if (i != ((long int) (sizeof (short)))) | return 1; | fprintf (f, "%lu", i); | } | /* Do not output a trailing newline, as this causes \r\n confusion | on some platforms. */ | return ferror (f) || fclose (f) != 0; | | ; | return 0; | } configure:23294: result: 0 configure:23308: checking size of int configure:23661: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:23665: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define SIZEOF_CHAR 0 | #define SIZEOF_SHORT 0 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | static long int longval () { return (long int) (sizeof (int)); } | static unsigned long int ulongval () { return (long int) (sizeof (int)); } | #include <stdio.h> | #include <stdlib.h> | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | FILE *f = fopen ("conftest.val", "w"); | if (! f) | return 1; | if (((long int) (sizeof (int))) < 0) | { | long int i = longval (); | if (i != ((long int) (sizeof (int)))) | return 1; | fprintf (f, "%ld", i); | } | else | { | unsigned long int i = ulongval (); | if (i != ((long int) (sizeof (int)))) | return 1; | fprintf (f, "%lu", i); | } | /* Do not output a trailing newline, as this causes \r\n confusion | on some platforms. */ | return ferror (f) || fclose (f) != 0; | | ; | return 0; | } configure:23701: result: 0 configure:23715: checking size of long configure:24068: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:24072: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define SIZEOF_CHAR 0 | #define SIZEOF_SHORT 0 | #define SIZEOF_INT 0 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | static long int longval () { return (long int) (sizeof (long)); } | static unsigned long int ulongval () { return (long int) (sizeof (long)); } | #include <stdio.h> | #include <stdlib.h> | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | FILE *f = fopen ("conftest.val", "w"); | if (! f) | return 1; | if (((long int) (sizeof (long))) < 0) | { | long int i = longval (); | if (i != ((long int) (sizeof (long)))) | return 1; | fprintf (f, "%ld", i); | } | else | { | unsigned long int i = ulongval (); | if (i != ((long int) (sizeof (long)))) | return 1; | fprintf (f, "%lu", i); | } | /* Do not output a trailing newline, as this causes \r\n confusion | on some platforms. */ | return ferror (f) || fclose (f) != 0; | | ; | return 0; | } configure:24108: result: 0 configure:24122: checking size of long long configure:24475: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:24479: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define SIZEOF_CHAR 0 | #define SIZEOF_SHORT 0 | #define SIZEOF_INT 0 | #define SIZEOF_LONG 0 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | static long int longval () { return (long int) (sizeof (long long)); } | static unsigned long int ulongval () { return (long int) (sizeof (long long)); } | #include <stdio.h> | #include <stdlib.h> | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | FILE *f = fopen ("conftest.val", "w"); | if (! f) | return 1; | if (((long int) (sizeof (long long))) < 0) | { | long int i = longval (); | if (i != ((long int) (sizeof (long long)))) | return 1; | fprintf (f, "%ld", i); | } | else | { | unsigned long int i = ulongval (); | if (i != ((long int) (sizeof (long long)))) | return 1; | fprintf (f, "%lu", i); | } | /* Do not output a trailing newline, as this causes \r\n confusion | on some platforms. */ | return ferror (f) || fclose (f) != 0; | | ; | return 0; | } configure:24515: result: 0 configure:24529: checking size of unsigned int configure:24882: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:24886: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define SIZEOF_CHAR 0 | #define SIZEOF_SHORT 0 | #define SIZEOF_INT 0 | #define SIZEOF_LONG 0 | #define SIZEOF_LONG_LONG 0 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | static long int longval () { return (long int) (sizeof (unsigned int)); } | static unsigned long int ulongval () { return (long int) (sizeof (unsigned int)); } | #include <stdio.h> | #include <stdlib.h> | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | FILE *f = fopen ("conftest.val", "w"); | if (! f) | return 1; | if (((long int) (sizeof (unsigned int))) < 0) | { | long int i = longval (); | if (i != ((long int) (sizeof (unsigned int)))) | return 1; | fprintf (f, "%ld", i); | } | else | { | unsigned long int i = ulongval (); | if (i != ((long int) (sizeof (unsigned int)))) | return 1; | fprintf (f, "%lu", i); | } | /* Do not output a trailing newline, as this causes \r\n confusion | on some platforms. */ | return ferror (f) || fclose (f) != 0; | | ; | return 0; | } configure:24922: result: 0 configure:24936: checking size of unsigned long configure:25289: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:25293: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define SIZEOF_CHAR 0 | #define SIZEOF_SHORT 0 | #define SIZEOF_INT 0 | #define SIZEOF_LONG 0 | #define SIZEOF_LONG_LONG 0 | #define SIZEOF_UNSIGNED_INT 0 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | static long int longval () { return (long int) (sizeof (unsigned long)); } | static unsigned long int ulongval () { return (long int) (sizeof (unsigned long)); } | #include <stdio.h> | #include <stdlib.h> | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | FILE *f = fopen ("conftest.val", "w"); | if (! f) | return 1; | if (((long int) (sizeof (unsigned long))) < 0) | { | long int i = longval (); | if (i != ((long int) (sizeof (unsigned long)))) | return 1; | fprintf (f, "%ld", i); | } | else | { | unsigned long int i = ulongval (); | if (i != ((long int) (sizeof (unsigned long)))) | return 1; | fprintf (f, "%lu", i); | } | /* Do not output a trailing newline, as this causes \r\n confusion | on some platforms. */ | return ferror (f) || fclose (f) != 0; | | ; | return 0; | } configure:25329: result: 0 configure:25343: checking size of unsigned long long configure:25696: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:25700: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define SIZEOF_CHAR 0 | #define SIZEOF_SHORT 0 | #define SIZEOF_INT 0 | #define SIZEOF_LONG 0 | #define SIZEOF_LONG_LONG 0 | #define SIZEOF_UNSIGNED_INT 0 | #define SIZEOF_UNSIGNED_LONG 0 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | static long int longval () { return (long int) (sizeof (unsigned long long)); } | static unsigned long int ulongval () { return (long int) (sizeof (unsigned long long)); } | #include <stdio.h> | #include <stdlib.h> | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | FILE *f = fopen ("conftest.val", "w"); | if (! f) | return 1; | if (((long int) (sizeof (unsigned long long))) < 0) | { | long int i = longval (); | if (i != ((long int) (sizeof (unsigned long long)))) | return 1; | fprintf (f, "%ld", i); | } | else | { | unsigned long int i = ulongval (); | if (i != ((long int) (sizeof (unsigned long long)))) | return 1; | fprintf (f, "%lu", i); | } | /* Do not output a trailing newline, as this causes \r\n confusion | on some platforms. */ | return ferror (f) || fclose (f) != 0; | | ; | return 0; | } configure:25736: result: 0 configure:25750: checking size of float configure:26103: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:26107: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define SIZEOF_CHAR 0 | #define SIZEOF_SHORT 0 | #define SIZEOF_INT 0 | #define SIZEOF_LONG 0 | #define SIZEOF_LONG_LONG 0 | #define SIZEOF_UNSIGNED_INT 0 | #define SIZEOF_UNSIGNED_LONG 0 | #define SIZEOF_UNSIGNED_LONG_LONG 0 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | static long int longval () { return (long int) (sizeof (float)); } | static unsigned long int ulongval () { return (long int) (sizeof (float)); } | #include <stdio.h> | #include <stdlib.h> | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | FILE *f = fopen ("conftest.val", "w"); | if (! f) | return 1; | if (((long int) (sizeof (float))) < 0) | { | long int i = longval (); | if (i != ((long int) (sizeof (float)))) | return 1; | fprintf (f, "%ld", i); | } | else | { | unsigned long int i = ulongval (); | if (i != ((long int) (sizeof (float)))) | return 1; | fprintf (f, "%lu", i); | } | /* Do not output a trailing newline, as this causes \r\n confusion | on some platforms. */ | return ferror (f) || fclose (f) != 0; | | ; | return 0; | } configure:26143: result: 0 configure:26157: checking size of double configure:26510: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:26514: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define SIZEOF_CHAR 0 | #define SIZEOF_SHORT 0 | #define SIZEOF_INT 0 | #define SIZEOF_LONG 0 | #define SIZEOF_LONG_LONG 0 | #define SIZEOF_UNSIGNED_INT 0 | #define SIZEOF_UNSIGNED_LONG 0 | #define SIZEOF_UNSIGNED_LONG_LONG 0 | #define SIZEOF_FLOAT 0 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | static long int longval () { return (long int) (sizeof (double)); } | static unsigned long int ulongval () { return (long int) (sizeof (double)); } | #include <stdio.h> | #include <stdlib.h> | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | FILE *f = fopen ("conftest.val", "w"); | if (! f) | return 1; | if (((long int) (sizeof (double))) < 0) | { | long int i = longval (); | if (i != ((long int) (sizeof (double)))) | return 1; | fprintf (f, "%ld", i); | } | else | { | unsigned long int i = ulongval (); | if (i != ((long int) (sizeof (double)))) | return 1; | fprintf (f, "%lu", i); | } | /* Do not output a trailing newline, as this causes \r\n confusion | on some platforms. */ | return ferror (f) || fclose (f) != 0; | | ; | return 0; | } configure:26550: result: 0 configure:26564: checking size of long double configure:26917: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:26921: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define SIZEOF_CHAR 0 | #define SIZEOF_SHORT 0 | #define SIZEOF_INT 0 | #define SIZEOF_LONG 0 | #define SIZEOF_LONG_LONG 0 | #define SIZEOF_UNSIGNED_INT 0 | #define SIZEOF_UNSIGNED_LONG 0 | #define SIZEOF_UNSIGNED_LONG_LONG 0 | #define SIZEOF_FLOAT 0 | #define SIZEOF_DOUBLE 0 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | static long int longval () { return (long int) (sizeof (long double)); } | static unsigned long int ulongval () { return (long int) (sizeof (long double)); } | #include <stdio.h> | #include <stdlib.h> | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | FILE *f = fopen ("conftest.val", "w"); | if (! f) | return 1; | if (((long int) (sizeof (long double))) < 0) | { | long int i = longval (); | if (i != ((long int) (sizeof (long double)))) | return 1; | fprintf (f, "%ld", i); | } | else | { | unsigned long int i = ulongval (); | if (i != ((long int) (sizeof (long double)))) | return 1; | fprintf (f, "%lu", i); | } | /* Do not output a trailing newline, as this causes \r\n confusion | on some platforms. */ | return ferror (f) || fclose (f) != 0; | | ; | return 0; | } configure:26957: result: 0 configure:26971: checking size of size_t configure:27324: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:27328: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define SIZEOF_CHAR 0 | #define SIZEOF_SHORT 0 | #define SIZEOF_INT 0 | #define SIZEOF_LONG 0 | #define SIZEOF_LONG_LONG 0 | #define SIZEOF_UNSIGNED_INT 0 | #define SIZEOF_UNSIGNED_LONG 0 | #define SIZEOF_UNSIGNED_LONG_LONG 0 | #define SIZEOF_FLOAT 0 | #define SIZEOF_DOUBLE 0 | #define SIZEOF_LONG_DOUBLE 0 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | static long int longval () { return (long int) (sizeof (size_t)); } | static unsigned long int ulongval () { return (long int) (sizeof (size_t)); } | #include <stdio.h> | #include <stdlib.h> | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | FILE *f = fopen ("conftest.val", "w"); | if (! f) | return 1; | if (((long int) (sizeof (size_t))) < 0) | { | long int i = longval (); | if (i != ((long int) (sizeof (size_t)))) | return 1; | fprintf (f, "%ld", i); | } | else | { | unsigned long int i = ulongval (); | if (i != ((long int) (sizeof (size_t)))) | return 1; | fprintf (f, "%lu", i); | } | /* Do not output a trailing newline, as this causes \r\n confusion | on some platforms. */ | return ferror (f) || fclose (f) != 0; | | ; | return 0; | } configure:27364: result: 0 configure:27378: checking size of ptrdiff_t configure:27731: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -o conftest -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:27735: $? = 1 configure: program exited with status 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define SIZEOF_CHAR 0 | #define SIZEOF_SHORT 0 | #define SIZEOF_INT 0 | #define SIZEOF_LONG 0 | #define SIZEOF_LONG_LONG 0 | #define SIZEOF_UNSIGNED_INT 0 | #define SIZEOF_UNSIGNED_LONG 0 | #define SIZEOF_UNSIGNED_LONG_LONG 0 | #define SIZEOF_FLOAT 0 | #define SIZEOF_DOUBLE 0 | #define SIZEOF_LONG_DOUBLE 0 | #define SIZEOF_SIZE_T 0 | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | static long int longval () { return (long int) (sizeof (ptrdiff_t)); } | static unsigned long int ulongval () { return (long int) (sizeof (ptrdiff_t)); } | #include <stdio.h> | #include <stdlib.h> | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | | FILE *f = fopen ("conftest.val", "w"); | if (! f) | return 1; | if (((long int) (sizeof (ptrdiff_t))) < 0) | { | long int i = longval (); | if (i != ((long int) (sizeof (ptrdiff_t)))) | return 1; | fprintf (f, "%ld", i); | } | else | { | unsigned long int i = ulongval (); | if (i != ((long int) (sizeof (ptrdiff_t)))) | return 1; | fprintf (f, "%lu", i); | } | /* Do not output a trailing newline, as this causes \r\n confusion | on some platforms. */ | return ferror (f) || fclose (f) != 0; | | ; | return 0; | } configure:27771: result: 0 configure:27782: checking for an ANSI C-conforming const configure:27865: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:27872: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define SIZEOF_CHAR 0 | #define SIZEOF_SHORT 0 | #define SIZEOF_INT 0 | #define SIZEOF_LONG 0 | #define SIZEOF_LONG_LONG 0 | #define SIZEOF_UNSIGNED_INT 0 | #define SIZEOF_UNSIGNED_LONG 0 | #define SIZEOF_UNSIGNED_LONG_LONG 0 | #define SIZEOF_FLOAT 0 | #define SIZEOF_DOUBLE 0 | #define SIZEOF_LONG_DOUBLE 0 | #define SIZEOF_SIZE_T 0 | #define SIZEOF_PTRDIFF_T 0 | /* end confdefs.h. */ | | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | /* FIXME: Include the comments suggested by Paul. */ | #ifndef __cplusplus | /* Ultrix mips cc rejects this. */ | typedef int charset[2]; | const charset cs; | /* SunOS 4.1.1 cc rejects this. */ | char const *const *pcpcc; | char **ppc; | /* NEC SVR4.0.2 mips cc rejects this. */ | struct point {int x, y;}; | static struct point const zero = {0,0}; | /* AIX XL C 1.02.0.0 rejects this. | It does not let you subtract one const X* pointer from another in | an arm of an if-expression whose if-part is not a constant | expression */ | const char *g = "string"; | pcpcc = &g + (g ? g-g : 0); | /* HPUX 7.0 cc rejects these. */ | ++pcpcc; | ppc = (char**) pcpcc; | pcpcc = (char const *const *) ppc; | { /* SCO 3.2v4 cc rejects this. */ | char *t; | char const *s = 0 ? (char *) 0 : (char const *) 0; | | *t++ = 0; | if (s) return 0; | } | { /* Someone thinks the Sun supposedly-ANSI compiler will reject this. */ | int x[] = {25, 17}; | const int *foo = &x[0]; | ++foo; | } | { /* Sun SC1.0 ANSI compiler rejects this -- but not the above. */ | typedef const int *iptr; | iptr p = 0; | ++p; | } | { /* AIX XL C 1.02.0.0 rejects this saying | "k.c", line 2.27: 1506-025 (S) Operand must be a modifiable lvalue. */ | struct s { int j; const int *ap[3]; }; | struct s *b; b->j = 5; | } | { /* ULTRIX-32 V3.1 (Rev 9) vcc rejects this */ | const int foo = 10; | if (!foo) return 0; | } | return !cs[0] && !zero.x; | #endif | | ; | return 0; | } configure:27887: result: no configure:27897: checking for size_t configure:27933: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -c -g -O2 -mtune=native -march=native conftest.c >&5 conftest.c:1: error: bad value (native) for -march= switch conftest.c:1: error: bad value (native) for -mtune= switch configure:27940: $? = 1 configure: failed program was: | /* confdefs.h. */ | #define PACKAGE_NAME "ABINIT" | #define PACKAGE_TARNAME "abinit" | #define PACKAGE_VERSION "7.10.2" | #define PACKAGE_STRING "ABINIT 7.10.2" | #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" | #define PACKAGE "abinit" | #define VERSION "7.10.2" | #define ABINIT_VERSION "7.10.2" | #define ABINIT_VERSION_MAJOR "7" | #define ABINIT_VERSION_MINOR "10" | #define ABINIT_VERSION_MICRO "2" | #define ABINIT_VERSION_BUILD "20150203" | #define ABINIT_VERSION_BASE "7.10" | #define HAVE_OS_LINUX 1 | #define CC_GNU 1 | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define CXX_GNU 1 | #define FC_GNU 1 | #define HAVE_FORTRAN2003 1 | #define FC_FUNC(name,NAME) name ## _ | #define FC_FUNC_(name,NAME) name ## _ | #define HAVE_NUMPY 1 | #define ABINIT_TARGET "x86_64_linux_gnu4.1" | #define HAVE_STDDEF_H 1 | #define HAVE_STDARG_H 1 | #define HAVE_STDIO_H 1 | #define HAVE_MATH_H 1 | #define HAVE_TERMIOS_H 1 | #define HAVE_ERRNO_H 1 | #define HAVE_MALLOC_H 1 | #define HAVE_MCHECK_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_SYS_RESOURCE_H 1 | #define SIZEOF_CHAR 0 | #define SIZEOF_SHORT 0 | #define SIZEOF_INT 0 | #define SIZEOF_LONG 0 | #define SIZEOF_LONG_LONG 0 | #define SIZEOF_UNSIGNED_INT 0 | #define SIZEOF_UNSIGNED_LONG 0 | #define SIZEOF_UNSIGNED_LONG_LONG 0 | #define SIZEOF_FLOAT 0 | #define SIZEOF_DOUBLE 0 | #define SIZEOF_LONG_DOUBLE 0 | #define SIZEOF_SIZE_T 0 | #define SIZEOF_PTRDIFF_T 0 | #define const /**/ | /* end confdefs.h. */ | #include <stdio.h> | #ifdef HAVE_SYS_TYPES_H | # include <sys/types.h> | #endif | #ifdef HAVE_SYS_STAT_H | # include <sys/stat.h> | #endif | #ifdef STDC_HEADERS | # include <stdlib.h> | # include <stddef.h> | #else | # ifdef HAVE_STDLIB_H | # include <stdlib.h> | # endif | #endif | #ifdef HAVE_STRING_H | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | # include <memory.h> | # endif | # include <string.h> | #endif | #ifdef HAVE_STRINGS_H | # include <strings.h> | #endif | #ifdef HAVE_INTTYPES_H | # include <inttypes.h> | #endif | #ifdef HAVE_STDINT_H | # include <stdint.h> | #endif | #ifdef HAVE_UNISTD_H | # include <unistd.h> | #endif | #ifdef FC_DUMMY_MAIN | #ifndef FC_DUMMY_MAIN_EQ_F77 | # ifdef __cplusplus | extern "C" | # endif | int FC_DUMMY_MAIN() { return 1; } | #endif | #endif | int | main () | { | if (sizeof (size_t)) | return 0; | ; | return 0; | } configure:28005: result: no configure:28024: checking whether the Fortran compiler accepts the ASYNCHRONOUS attribute configure:28045: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -o conftest -g -ffree-line-length-none conftest.F90 >&5 In file conftest.F90:3 INTEGER, ASYNCHRONOUS :: int_array(10) 1 Error: Syntax error in data declaration at (1) configure:28052: $? = 1 configure: failed program was: | program main | | INTEGER, ASYNCHRONOUS :: int_array(10) | | end configure:28086: result: no configure:28092: checking whether the Gfortran compiler supports BACKTRACE configure:28114: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -o conftest -g -ffree-line-length-none conftest.F90 >&5 /tmp/ccKKxUbX.o: In function `MAIN__': /home_cluster/fis718/eliemouj/abinit-7.10.2/conftest.F90:3: undefined reference to `backtrace_' collect2: ld returned 1 exit status configure:28121: $? = 1 configure: failed program was: | program main | | call backtrace() | | | end configure:28155: result: no configure:28161: checking whether the Fortran compiler supports GET_COMMAND_ARGUMENT configure:28190: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:28197: $? = 0 configure:28231: result: yes configure:28237: checking whether the Fortran compiler supports EXECUTE_COMMAND_LINE configure:28264: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -o conftest -g -ffree-line-length-none conftest.F90 >&5 /tmp/ccDNPXmf.o: In function `MAIN__': /home_cluster/fis718/eliemouj/abinit-7.10.2/conftest.F90:5: undefined reference to `execute_command_line_' /home_cluster/fis718/eliemouj/abinit-7.10.2/conftest.F90:8: undefined reference to `execute_command_line_' collect2: ld returned 1 exit status configure:28271: $? = 1 configure: failed program was: | program main | | integer :: i | | call execute_command_line ("external_prog.exe", exitstat=i) | print *, "Exit status of external_prog.exe was ", i | | call execute_command_line ("reindex_files.exe", wait=.false.) | print *, "Now reindexing files in the background" | | end configure:28305: result: no configure:28311: checking whether the Fortran compiler supports SYSTEM configure:28332: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:28339: $? = 0 configure:28373: result: yes configure:28379: checking whether the Fortran compiler accepts the CONTIGUOUS attribute configure:28405: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -o conftest -g -ffree-line-length-none conftest.F90 >&5 In file conftest.F90:6 integer,contiguous,pointer :: i_ptr(:) 1 Error: Syntax error in data declaration at (1) In file conftest.F90:7 real(dp),contiguous,pointer :: r_ptr(:,:) 1 Error: Syntax error in data declaration at (1) In file conftest.F90:8 complex(dpc),contiguous,pointer :: c_ptr(:,:,:) 1 Error: Syntax error in data declaration at (1) configure:28412: $? = 1 configure: failed program was: | program main | | integer, parameter :: dp=kind(1.0d0) | integer, parameter :: dpc=kind((1.0_dp,1.0_dp)) | | integer,contiguous,pointer :: i_ptr(:) | real(dp),contiguous,pointer :: r_ptr(:,:) | complex(dpc),contiguous,pointer :: c_ptr(:,:,:) | | end configure:28446: result: no configure:28452: checking whether the Fortran compiler supports allocatable arrays in datatypes configure:28482: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -o conftest -g -ffree-line-length-none conftest.F90 >&5 In file conftest.F90:8 integer,allocatable :: i(:) 1 Error: Attribute at (1) is not allowed in a TYPE definition In file conftest.F90:9 real(dp),allocatable :: r(:,:) 1 Error: Attribute at (1) is not allowed in a TYPE definition In file conftest.F90:10 complex(dpc),allocatable :: c(:,:,:) 1 Error: Attribute at (1) is not allowed in a TYPE definition In file conftest.F90:11 end type test_type 1 Error: Derived type definition at (1) has no components configure:28489: $? = 1 configure: failed program was: | program main | | | integer, parameter :: dp=kind(1.0d0) | integer, parameter :: dpc=kind((1.0_dp,1.0_dp)) | | type test_type | integer,allocatable :: i(:) | real(dp),allocatable :: r(:,:) | complex(dpc),allocatable :: c(:,:,:) | end type test_type | | | end configure:28523: result: no configure:28529: checking whether the Fortran compiler supports IEEE_EXCEPTIONS configure:28556: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -o conftest -g -ffree-line-length-none conftest.F90 >&5 In file conftest.F90:3 use, intrinsic :: ieee_exceptions 1 Error: Unclassifiable statement at (1) In file conftest.F90:4 type(ieee_status_type) :: status_value 1 Error: Derived type 'ieee_status_type' at (1) is being used before it is defined configure:28563: $? = 1 configure: failed program was: | program main | | use, intrinsic :: ieee_exceptions | type(ieee_status_type) :: status_value | | call ieee_get_status(status_value) ! Get the flags | call ieee_set_flag(ieee_all,.false.) ! Set the flags quiet | call ieee_set_status(status_value) ! Restore the flags | | | end configure:28597: result: no configure:28603: checking whether the Fortran compiler supports IOMSG configure:28631: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -o conftest -g -ffree-line-length-none conftest.F90 >&5 configure:28638: $? = 0 configure:28672: result: yes configure:28678: checking whether the Fortran compiler provides the iso_c_binding module configure:28706: /home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpifc -o conftest -g -ffree-line-length-none conftest.F90 >&5 In file conftest.F90:3 use iso_c_binding 1 Fatal Error: Can't open module file 'iso_c_binding.mod' for reading at (1): No such file or directory configure:28713: $? = 1 configure: failed program was: | program main | | use iso_c_binding | implicit none | integer(c_int) :: ii | logical :: lbool | type(c_ptr) :: ptr | ptr = c_null_ptr | lbool = c_associated(ptr) | | | end configure:28746: error: Fortran compiler does not provide iso_c_binding module. Use a more recent version or a different compiler ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_build=x86_64-unknown-linux-gnu ac_cv_c_bigendian=no ac_cv_c_compiler_gnu=yes ac_cv_c_const=no ac_cv_cxx_compiler_gnu=yes ac_cv_env_ARFLAGS_DEBUG_set= ac_cv_env_ARFLAGS_DEBUG_value= ac_cv_env_ARFLAGS_EXTRA_set= ac_cv_env_ARFLAGS_EXTRA_value= ac_cv_env_ARFLAGS_OPTIM_set= ac_cv_env_ARFLAGS_OPTIM_value= ac_cv_env_CCC_set= ac_cv_env_CCC_value= ac_cv_env_CC_LDFLAGS_DEBUG_set= ac_cv_env_CC_LDFLAGS_DEBUG_value= ac_cv_env_CC_LDFLAGS_OPTIM_set= ac_cv_env_CC_LDFLAGS_OPTIM_value= ac_cv_env_CC_LDFLAGS_set= ac_cv_env_CC_LDFLAGS_value= ac_cv_env_CC_LIBS_DEBUG_set= ac_cv_env_CC_LIBS_DEBUG_value= ac_cv_env_CC_LIBS_OPTIM_set= ac_cv_env_CC_LIBS_OPTIM_value= ac_cv_env_CC_LIBS_set= ac_cv_env_CC_LIBS_value= ac_cv_env_CC_set=set ac_cv_env_CC_value=icc ac_cv_env_CFLAGS_DEBUG_set= ac_cv_env_CFLAGS_DEBUG_value= ac_cv_env_CFLAGS_EXTRA_set= ac_cv_env_CFLAGS_EXTRA_value= ac_cv_env_CFLAGS_OPTIM_set= ac_cv_env_CFLAGS_OPTIM_value= ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_DEBUG_set= ac_cv_env_CPPFLAGS_DEBUG_value= ac_cv_env_CPPFLAGS_EXTRA_set= ac_cv_env_CPPFLAGS_EXTRA_value= ac_cv_env_CPPFLAGS_OPTIM_set= ac_cv_env_CPPFLAGS_OPTIM_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_CXXFLAGS_DEBUG_set= ac_cv_env_CXXFLAGS_DEBUG_value= ac_cv_env_CXXFLAGS_EXTRA_set= ac_cv_env_CXXFLAGS_EXTRA_value= ac_cv_env_CXXFLAGS_OPTIM_set= ac_cv_env_CXXFLAGS_OPTIM_value= ac_cv_env_CXXFLAGS_set= ac_cv_env_CXXFLAGS_value= ac_cv_env_CXX_LDFLAGS_DEBUG_set= ac_cv_env_CXX_LDFLAGS_DEBUG_value= ac_cv_env_CXX_LDFLAGS_EXTRA_set= ac_cv_env_CXX_LDFLAGS_EXTRA_value= ac_cv_env_CXX_LDFLAGS_OPTIM_set= ac_cv_env_CXX_LDFLAGS_OPTIM_value= ac_cv_env_CXX_LDFLAGS_set= ac_cv_env_CXX_LDFLAGS_value= ac_cv_env_CXX_LIBS_DEBUG_set= ac_cv_env_CXX_LIBS_DEBUG_value= ac_cv_env_CXX_LIBS_OPTIM_set= ac_cv_env_CXX_LIBS_OPTIM_value= ac_cv_env_CXX_LIBS_set= ac_cv_env_CXX_LIBS_value= ac_cv_env_CXX_set= ac_cv_env_CXX_value= ac_cv_env_FCFLAGS_DEBUG_set= ac_cv_env_FCFLAGS_DEBUG_value= ac_cv_env_FCFLAGS_EXTRA_set= ac_cv_env_FCFLAGS_EXTRA_value= ac_cv_env_FCFLAGS_OPENMP_set= ac_cv_env_FCFLAGS_OPENMP_value= ac_cv_env_FCFLAGS_OPTIM_set= ac_cv_env_FCFLAGS_OPTIM_value= ac_cv_env_FCFLAGS_set= ac_cv_env_FCFLAGS_value= ac_cv_env_FC_LDFLAGS_DEBUG_set= ac_cv_env_FC_LDFLAGS_DEBUG_value= ac_cv_env_FC_LDFLAGS_EXTRA_set= ac_cv_env_FC_LDFLAGS_EXTRA_value= ac_cv_env_FC_LDFLAGS_OPTIM_set= ac_cv_env_FC_LDFLAGS_OPTIM_value= ac_cv_env_FC_LDFLAGS_set= ac_cv_env_FC_LDFLAGS_value= ac_cv_env_FC_LIBS_DEBUG_set= ac_cv_env_FC_LIBS_DEBUG_value= ac_cv_env_FC_LIBS_OPTIM_set= ac_cv_env_FC_LIBS_OPTIM_value= ac_cv_env_FC_LIBS_set= ac_cv_env_FC_LIBS_value= ac_cv_env_FC_set=set ac_cv_env_FC_value=ifort ac_cv_env_FPPFLAGS_DEBUG_set= ac_cv_env_FPPFLAGS_DEBUG_value= ac_cv_env_FPPFLAGS_EXTRA_set= ac_cv_env_FPPFLAGS_EXTRA_value= ac_cv_env_FPPFLAGS_OPTIM_set= ac_cv_env_FPPFLAGS_OPTIM_value= ac_cv_env_FPPFLAGS_set= ac_cv_env_FPPFLAGS_value= ac_cv_env_FPP_set= ac_cv_env_FPP_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_LIBS_set= ac_cv_env_LIBS_value= ac_cv_env_MPI_RUNNER_set= ac_cv_env_MPI_RUNNER_value= ac_cv_env_PYFLAGS_set= ac_cv_env_PYFLAGS_value= ac_cv_env_PYTHON_CPPFLAGS_set= ac_cv_env_PYTHON_CPPFLAGS_value= ac_cv_env_SERIAL_RUNNER_set= ac_cv_env_SERIAL_RUNNER_value= ac_cv_env_XPPFLAGS_DEBUG_set= ac_cv_env_XPPFLAGS_DEBUG_value= ac_cv_env_XPPFLAGS_EXTRA_set= ac_cv_env_XPPFLAGS_EXTRA_value= ac_cv_env_XPPFLAGS_OPTIM_set= ac_cv_env_XPPFLAGS_OPTIM_value= ac_cv_env_XPPFLAGS_set= ac_cv_env_XPPFLAGS_value= ac_cv_env_XPP_set= ac_cv_env_XPP_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_fc_compiler_gnu=yes ac_cv_fc_dummy_main=none ac_cv_fc_libs=' -L/usr/lib64/mpich2/lib -L/opt/intel/Compiler/11.1/069/lib/intel64 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2 -L/usr/lib/gcc/x86_64-redhat-linux/4.1.2/../../../../lib64 -L/lib/../lib64 -L/usr/lib/../lib64 -lmpichf90 -lmpich -lopa -lpthread -lrt -lgfortranbegin -lgfortran -lm' ac_cv_fc_mangling='lower case, underscore, no extra underscore' ac_cv_fc_srcext_F90=none ac_cv_fortran_dummy_main=none ac_cv_func_abort=no ac_cv_func_mallinfo=no ac_cv_header_Python_h=yes ac_cv_header_errno_h=yes ac_cv_header_inttypes_h=yes ac_cv_header_malloc_h=yes ac_cv_header_math_h=yes ac_cv_header_mcheck_h=yes ac_cv_header_memory_h=yes ac_cv_header_stdarg_h=yes ac_cv_header_stdc=yes ac_cv_header_stddef_h=yes ac_cv_header_stdint_h=yes ac_cv_header_stdio_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_malloc_h=no ac_cv_header_sys_resource_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_termios_h=yes ac_cv_header_unistd_h=yes ac_cv_host=x86_64-unknown-linux-gnu ac_cv_objext=o ac_cv_path_BOURNE_SHELL=/bin/sh ac_cv_path_EGREP='/bin/grep -E' ac_cv_path_GREP=/bin/grep ac_cv_path_MV=/bin/mv ac_cv_path_PERL=/usr/bin/perl ac_cv_path_RM=/bin/rm ac_cv_path_SED=/bin/sed ac_cv_path_install='/usr/bin/install -c' ac_cv_path_mkdir=/bin/mkdir ac_cv_prog_AR=ar ac_cv_prog_AWK=gawk ac_cv_prog_CPP='/home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E' ac_cv_prog_PATCH=patch ac_cv_prog_PYTHON=python ac_cv_prog_TAR=tar ac_cv_prog_TRUE_CPP=cpp ac_cv_prog_ac_ct_CC=/home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc ac_cv_prog_ac_ct_RANLIB=ranlib ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes ac_cv_prog_cxx_g=yes ac_cv_prog_fc_g=yes ac_cv_prog_fc_v=-v ac_cv_prog_make_make_set=yes ac_cv_sizeof_char=0 ac_cv_sizeof_double=0 ac_cv_sizeof_float=0 ac_cv_sizeof_int=0 ac_cv_sizeof_long=0 ac_cv_sizeof_long_double=0 ac_cv_sizeof_long_long=0 ac_cv_sizeof_ptrdiff_t=0 ac_cv_sizeof_short=0 ac_cv_sizeof_size_t=0 ac_cv_sizeof_unsigned_int=0 ac_cv_sizeof_unsigned_long=0 ac_cv_sizeof_unsigned_long_long=0 ac_cv_target=x86_64-unknown-linux-gnu ac_cv_type_size_t=no am_cv_CC_dependencies_compiler_type=gcc3 am_cv_CXX_dependencies_compiler_type=gcc3 am_cv_prog_tar_ustar=gnutar ax_cv_f90_modext=mod ## ----------------- ## ## Output variables. ## ## ----------------- ## ABINIT_BINARY_PACKAGE='abinit-7.10.2_x86_64_linux_gnu4.1' ABINIT_TARGET='x86_64_linux_gnu4.1' ABINIT_VERSION='7.10.2' ABINIT_VERSION_BASE='7.10' ABINIT_VERSION_BUILD='20150203' ABINIT_VERSION_MAJOR='7' ABINIT_VERSION_MICRO='2' ABINIT_VERSION_MINOR='10' ABI_CPPFLAGS='' ACLOCAL='${SHELL} /home_cluster/fis718/eliemouj/abinit-7.10.2/config/gnu/missing --run aclocal-1.11' AMDEPBACKSLASH='\' AMDEP_FALSE='#' AMDEP_TRUE='' AMTAR='${SHELL} /home_cluster/fis718/eliemouj/abinit-7.10.2/config/gnu/missing --run tar' AR='ar' ARFLAGS=' rc' ARFLAGS_64BITS='' ARFLAGS_CMD='rc' ARFLAGS_DEBUG='' ARFLAGS_EXTRA='' ARFLAGS_HINTS='' ARFLAGS_OPTIM='' ATOMPAW_BIN='' AUTOCONF='${SHELL} /home_cluster/fis718/eliemouj/abinit-7.10.2/config/gnu/missing --run autoconf' AUTOHEADER='${SHELL} /home_cluster/fis718/eliemouj/abinit-7.10.2/config/gnu/missing --run autoheader' AUTOMAKE='${SHELL} /home_cluster/fis718/eliemouj/abinit-7.10.2/config/gnu/missing --run automake-1.11' AWK='gawk' BAZAAR='' BOURNE_SHELL='/bin/sh' CC='/home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc' CCDEPMODE='depmode=gcc3' CC_LDFLAGS=' ' CC_LDFLAGS_64BITS='' CC_LDFLAGS_DEBUG='' CC_LDFLAGS_EXTRA='' CC_LDFLAGS_GPU='' CC_LDFLAGS_HINTS='' CC_LDFLAGS_OPTIM='' CC_LIBS=' ' CC_LIBS_64BITS='' CC_LIBS_DEBUG='' CC_LIBS_EXTRA='' CC_LIBS_GPU='' CC_LIBS_HINTS='' CC_LIBS_OPTIM='' CFLAGS=' -g -O2 -mtune=native -march=native ' CFLAGS_64BITS='' CFLAGS_DEBUG='-g' CFLAGS_EXTRA='' CFLAGS_GPU='' CFLAGS_HINTS='' CFLAGS_OPTIM='-O2 -mtune=native -march=native' CPP='/home_cluster/fis718/eliemouj/abinit-7.10.2/config/wrappers/wrap-mpicc -E' CPPFLAGS=' ' CPPFLAGS_64BITS='' 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src_65_nonlocal_incs='-I$(top_builddir)/src/65_nonlocal -I$(top_srcdir)/src/65_nonlocal' src_65_psp_incs='-I$(top_builddir)/src/65_psp -I$(top_srcdir)/src/65_psp' src_66_fock_incs='-I$(top_builddir)/src/66_fock -I$(top_srcdir)/src/66_fock' src_66_paw_incs='-I$(top_builddir)/src/66_paw -I$(top_srcdir)/src/66_paw' src_66_wfs_incs='-I$(top_builddir)/src/66_wfs -I$(top_srcdir)/src/66_wfs' src_67_common_incs='-I$(top_builddir)/src/67_common -I$(top_srcdir)/src/67_common' src_68_dmft_incs='-I$(top_builddir)/src/68_dmft -I$(top_srcdir)/src/68_dmft' src_68_lotf_incs='-I$(top_builddir)/src/68_lotf -I$(top_srcdir)/src/68_lotf' src_68_recursion_incs='-I$(top_builddir)/src/68_recursion -I$(top_srcdir)/src/68_recursion' src_68_rsprc_incs='-I$(top_builddir)/src/68_rsprc -I$(top_srcdir)/src/68_rsprc' src_69_wfdesc_incs='-I$(top_builddir)/src/69_wfdesc -I$(top_srcdir)/src/69_wfdesc' src_70_gw_incs='-I$(top_builddir)/src/70_gw -I$(top_srcdir)/src/70_gw' src_71_bse_incs='-I$(top_builddir)/src/71_bse -I$(top_srcdir)/src/71_bse' src_72_response_incs='-I$(top_builddir)/src/72_response -I$(top_srcdir)/src/72_response' src_77_ddb_incs='-I$(top_builddir)/src/77_ddb -I$(top_srcdir)/src/77_ddb' src_77_suscep_incs='-I$(top_builddir)/src/77_suscep -I$(top_srcdir)/src/77_suscep' src_79_seqpar_mpi_incs='-I$(top_builddir)/src/79_seqpar_mpi -I$(top_srcdir)/src/79_seqpar_mpi' src_83_cut3d_incs='-I$(top_builddir)/src/83_cut3d -I$(top_srcdir)/src/83_cut3d' src_94_scfcv_incs='-I$(top_builddir)/src/94_scfcv -I$(top_srcdir)/src/94_scfcv' src_95_drive_incs='-I$(top_builddir)/src/95_drive -I$(top_srcdir)/src/95_drive' src_incs_incs='-I$(top_builddir)/src/incs -I$(top_srcdir)/src/incs' src_mods_incs='-I$(top_builddir)/src/mods -I$(top_srcdir)/src/mods' subdirs='' sysconfdir='${prefix}/etc' target='x86_64-unknown-linux-gnu' target_alias='' target_cpu='x86_64' target_os='linux-gnu' target_vendor='unknown' with_algo_flavor='none' with_algo_incs='' with_algo_libs='' with_atompaw_bins='' with_atompaw_incs='' with_atompaw_libs='' with_bigdft_incs='' with_bigdft_libs='' with_config_file='' with_dft_flavor='none' with_etsf_io_incs='' with_etsf_io_libs='' with_fc_vendor='' with_fc_version='' with_fft_flavor='none' with_fft_incs='' with_fft_libs='' with_fox_incs='' with_fox_libs='' with_gnu_ld='' with_gpu_cflags='' with_gpu_cppflags='' with_gpu_flavor='cuda-double' with_gpu_incs='' with_gpu_ldflags='' with_gpu_libs='' with_gpu_prefix='' with_libpspio_incs='' with_libpspio_libs='' with_libxc_incs='' with_libxc_libs='' with_linalg_flavor='netlib' with_linalg_incs='' with_linalg_libs='' with_math_flavor='none' with_math_incs='' with_math_libs='' with_mpi_incs='' with_mpi_level='' with_mpi_libs='' with_mpi_prefix='/usr' with_netcdf_incs='' with_netcdf_libs='' with_tardir='' with_timer_flavor='abinit' with_timer_incs='' with_timer_libs='' with_trio_flavor='none' with_wannier90_bins='' with_wannier90_incs='' with_wannier90_libs='' with_yaml_incs='' with_yaml_libs='' ## ----------- ## ## confdefs.h. ## ## ----------- ## #define PACKAGE_NAME "ABINIT" #define PACKAGE_TARNAME "abinit" #define PACKAGE_VERSION "7.10.2" #define PACKAGE_STRING "ABINIT 7.10.2" #define PACKAGE_BUGREPORT "https://bugs.launchpad.net/abinit/" #define PACKAGE "abinit" #define VERSION "7.10.2" #define ABINIT_VERSION "7.10.2" #define ABINIT_VERSION_MAJOR "7" #define ABINIT_VERSION_MINOR "10" #define ABINIT_VERSION_MICRO "2" #define ABINIT_VERSION_BUILD "20150203" #define ABINIT_VERSION_BASE "7.10" #define HAVE_OS_LINUX 1 #define CC_GNU 1 #define STDC_HEADERS 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDLIB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define CXX_GNU 1 #define FC_GNU 1 #define HAVE_FORTRAN2003 1 #define FC_FUNC(name,NAME) name ## _ #define FC_FUNC_(name,NAME) name ## _ #define HAVE_NUMPY 1 #define ABINIT_TARGET "x86_64_linux_gnu4.1" #define HAVE_STDDEF_H 1 #define HAVE_STDARG_H 1 #define HAVE_STDIO_H 1 #define HAVE_MATH_H 1 #define HAVE_TERMIOS_H 1 #define HAVE_ERRNO_H 1 #define HAVE_MALLOC_H 1 #define HAVE_MCHECK_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE_SYS_RESOURCE_H 1 #define SIZEOF_CHAR 0 #define SIZEOF_SHORT 0 #define SIZEOF_INT 0 #define SIZEOF_LONG 0 #define SIZEOF_LONG_LONG 0 #define SIZEOF_UNSIGNED_INT 0 #define SIZEOF_UNSIGNED_LONG 0 #define SIZEOF_UNSIGNED_LONG_LONG 0 #define SIZEOF_FLOAT 0 #define SIZEOF_DOUBLE 0 #define SIZEOF_LONG_DOUBLE 0 #define SIZEOF_SIZE_T 0 #define SIZEOF_PTRDIFF_T 0 #define const /**/ #define size_t unsigned int #define HAVE_FC_COMMAND_ARGUMENT 1 #define HAVE_FC_SYSTEM 1 #define HAVE_FC_IOMSG 1 configure: exit 1