I too have encountered this as mentioned in one of my previous emails (
http://comments.gmane.org/gmane.comp.clustering.open-mpi.user/21000). I've
done many tests for our algorithms with 1.8.1 version and it didn't have
this, but not sure about 1.8.2.

Thank you,
saliya


On Fri, Jul 25, 2014 at 11:56 AM, Jeff Squyres (jsquyres) <
jsquy...@cisco.com> wrote:

> That's quite odd that it only happens for Java programs -- it should
> happen for *all* programs, based on the stack trace you've shown.
>
> Can you print the value of the lds struct where the error occurs?
>
>
> On Jul 25, 2014, at 2:29 AM, Siegmar Gross <
> siegmar.gr...@informatik.hs-fulda.de> wrote:
>
> > Hi,
> >
> > I have installed openmpi-1.8.2rc2 with Sun c 5.12 on Solaris
> > 10 Sparc and x86_64 and I receive a segmentation fault, if I
> > run a small Java program.
> >
> > rs0 java 105 mpiexec -np 1 java InitFinalizeMain
> > #
> > # A fatal error has been detected by the Java Runtime Environment:
> > #
> > #  SIGSEGV (0xb) at pc=0xffffffff7ea3c830, pid=18363, tid=2
> > #
> > # JRE version: Java(TM) SE Runtime Environment (8.0-b132) (build
> 1.8.0-b132)
> > # Java VM: Java HotSpot(TM) 64-Bit Server VM (25.0-b70 mixed mode
> solaris-sparc
> > compressed oops)
> > # Problematic frame:
> > # C  [libc.so.1+0x3c830]  strlen+0x50
> > ...
> >
> >
> > I get the following output if I run the program in "dbx".
> >
> > ...
> > RTC: Running program...
> > Write to unallocated (wua) on thread 1:
> > Attempting to write 1 byte at address 0xffffffff79f04000
> > t@1 (l@1) stopped in _readdir at 0xffffffff56574da0
> > 0xffffffff56574da0: _readdir+0x0064:    call
> > _PROCEDURE_LINKAGE_TABLE_+0x2380 [PLT] ! 0xffffffff56742a80
> > Current function is find_dyn_components
> >  397                       if (0 != lt_dlforeachfile(dir, save_filename,
> NULL))
> > {
> > (dbx)
> >
> >
> > I get the following output if I run the program on Solaris 10
> > x86_64.
> >
> > ...
> > RTC: Running program...
> > Reading disasm.so
> > Read from uninitialized (rui) on thread 1:
> > Attempting to read 1 byte at address 0x437387
> >    which is 15 bytes into a heap block of size 16 bytes at 0x437378
> > This block was allocated from:
> >        [1] vasprintf() at 0xfffffd7fdc9b335a
> >        [2] asprintf() at 0xfffffd7fdc9b3452
> >        [3] opal_output_init() at line 184 in "output.c"
> >        [4] do_open() at line 548 in "output.c"
> >        [5] opal_output_open() at line 219 in "output.c"
> >        [6] opal_malloc_init() at line 68 in "malloc.c"
> >        [7] opal_init_util() at line 258 in "opal_init.c"
> >        [8] opal_init() at line 363 in "opal_init.c"
> >
> > t@1 (l@1) stopped in do_open at line 638 in file "output.c"
> >  638           info[i].ldi_prefix = strdup(lds->lds_prefix);
> > (dbx)
> >
> >
> > Hopefully the above output helps to fix the errors. Can I provide
> > anything else? Thank you very much for any help in advance.
> >
> >
> > Kind regards
> >
> > Siegmar
> >
> > _______________________________________________
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> > Link to this post:
> http://www.open-mpi.org/community/lists/users/2014/07/24870.php
>
>
> --
> Jeff Squyres
> jsquy...@cisco.com
> For corporate legal information go to:
> http://www.cisco.com/web/about/doing_business/legal/cri/
>
> _______________________________________________
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> Link to this post:
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>



-- 
Saliya Ekanayake esal...@gmail.com
Cell 812-391-4914 Home 812-961-6383
http://saliya.org

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