Have you tried upgrading to a newer version of Open MPI? The 1.4.x series is several generations old. Open MPI 1.7.4 was just released yesterday.
On Feb 5, 2014, at 9:58 PM, Ross Boylan <r...@biostat.ucsf.edu> wrote: > On 1/31/2014 1:08 PM, Ross Boylan wrote: >> I am getting the following error, amidst many successful message sends: >> [n10][[50048,1],1][../../../../../../ompi/mca/btl/tcp/btl_tcp_frag.c:118:mca_btl_tcp_frag_send] >> mca_btl_tcp_frag_send: writev error (0x7f6155970038, 578659815) >> Bad address(1) >> > I think I've tracked down the immediate cause: I was sending a very large > object (from R--I assume serialized into a byte stream) that was over 3G. > I'm not sure why it would produce that error, but it doesn't seem that > surprising that something would go wrong. > > Ross >> Any ideas about what is going on or what I can do to fix it? >> >> I am using the openmpi-bin 1.4.2-4 Debian package on a cluster running >> Debian squeeze. >> >> I couldn't find a config.log file; there is >> /etc/openmpi/openmpi-mca-params.conf, which is completely commented out. >> >> Invocation is from R 3.0.1 (debian package) with Rmpi 0.6.3 built by me from >> source in a local directory. My sends all use mpi.isend.Robj and the >> receives use mpi.recv.Robj, both from the Rmpi library. >> >> The jobs were started with rmpilaunch; it and the hosts file are included in >> the attachments. TCP connections. rmpilaunch leaves me in an R session on >> the master. I invoked the code inside the toplevel() function toward the >> bottom of dbox-master.R. >> >> The program source files and other background information is in the attached >> file. n10 has the output of ompi_info --all, and n1011 has other info for >> both nodes that were active (n10 was master; n11 had some slaves). >> >> >> _______________________________________________ >> users mailing list >> >> us...@open-mpi.org >> http://www.open-mpi.org/mailman/listinfo.cgi/users > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users -- Jeff Squyres jsquy...@cisco.com For corporate legal information go to: http://www.cisco.com/web/about/doing_business/legal/cri/
