The procs attempt to open a socket back to mpirun for communication, so the 
firewall has to allow TCP communication. I usually turn on the "remote login" 
feature in the "sharing" area in preferences.


On Jan 23, 2014, at 4:34 PM, Dan Hsu <dk...@ucdavis.edu> wrote:

> Hi All
> 
> Am trying to run a parallel molecular simulation from the directory 
> containing the executable (using only available cores on the local cpus) on 
> Mac Lion and keep getting an apparent firewall error that cannot be resolved. 
> I am entering:
> 
> mpirun  -np 2 -e ./mpierr1 dock6.mpi -otherinput
> 
> and get transient (too quick to Allow) notification messages 'Do you want the 
> application "orterun" to accept incoming network connections? Clicking Deny 
> may limit....... The setting can be changed in the firewall pane......."
> 
> The mpirun message says:
> --------------
> Initializing MPI Routines...
> Initializing MPI Routines...
> --------------
> 
> I can specify orterun as a trusted app with "sudo 
> /usr/libexec/ApplicationFirewall/socketfilterfw -t /usr/local/bin/orterun". 
> Before, and after allowing firewall access by orterun and dock6.mpi I get the 
> following by viewing the /var/log/appfirewall.log:
> 
> Jan 24 00:48:45 Dans-Mac Firewall[23513]: orterun is listening from 
> 0.0.0.0:50722 proto=6
> Jan 24 00:48:45 Dans-Mac Firewall[23513]: dock6.mpi is listening from 
> 0.0.0.0:50723 proto=6
> Jan 24 00:48:45 Dans-Mac Firewall[23513]: dock6.mpi is listening from 
> 0.0.0.0:50724 proto=6
> Jan 24 00:48:45 Dans-Mac Firewall[23513]: dock6.mpi is listening from 
> 0.0.0.0:1024 proto=6
> Jan 24 00:48:45 Dans-Mac Firewall[23513]: dock6.mpi is listening from 
> 0.0.0.0:1025 proto=6
> 
> It appears that something is trying to start but cannot, and I dont know what 
> else to try. Can anyone suggest how this might be resolved?
> 
> Thanks much for any input!
> Dan
> 
> 
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