Ralph, I just sent out another post with the c file attached.
If you can get that to work, and even if you can't can you tell me what configure options you use, and what version of open-mpi? Thanks. Ron On Wed, Jan 15, 2014 at 10:36 AM, Ralph Castain <r...@open-mpi.org> wrote: > BTW: could you send me your sample test code? > > > On Wed, Jan 15, 2014 at 10:34 AM, Ralph Castain <r...@open-mpi.org> wrote: > >> I regularly build on Mavericks and run without problem, though I haven't >> tried a parallel IO app. I'll give yours a try later, when I get back to my >> Mac. >> >> >> >> On Wed, Jan 15, 2014 at 10:04 AM, Ronald Cohen <rhco...@lbl.gov> wrote: >> >>> I have been struggling trying to get a usable build of openmpi on Mac >>> OSX Mavericks (10.9.1). I can get openmpi to configure and build without >>> error, but have problems after that which depend on the openmpi version. >>> >>> With 1.6.5, make check fails the opal_datatype_test, ddt_test, and >>> ddt_raw tests. The various atomic_* tests pass. See checklogs_1.6.5, >>> attached as a .gz file. >>> >>> Following suggestions from openmpi discussions I tried openmpi version >>> 1.7.4rc1. In this case make check indicates all tests passed. But when I >>> proceeded to try to build a parallel code (parallel HDF5) it failed. >>> Following an email exchange with the HDF5 support people, they suggested I >>> try to compile and run the attached bit of simple code Sample_mpio.c (which >>> they supplied) which does not use any HDF5, but just attempts a parallel >>> write to a file and parallel read. That test failed when requesting more >>> than 1 processor -- which they say indicates a failure of the openmpi >>> installation. The error message was: >>> >>> MPI_INIT: argc 1 >>> MPI_INIT: argc 1 >>> Testing simple C MPIO program with 2 processes accessing file >>> ./mpitest.data >>> (Filename can be specified via program argument) >>> Proc 0: hostname=Ron-Cohen-MBP.local >>> Proc 1: hostname=Ron-Cohen-MBP.local >>> MPI_BARRIER[0]: comm MPI_COMM_WORLD >>> MPI_BARRIER[1]: comm MPI_COMM_WORLD >>> Proc 0: MPI_File_open with MPI_MODE_EXCL failed (MPI_ERR_FILE: invalid >>> file) >>> MPI_ABORT[0]: comm MPI_COMM_WORLD errorcode 1 >>> MPI_BCAST[1]: buffer 7fff5a483048 count 1 datatype MPI_INT root 0 comm >>> MPI_COMM_WORLD >>> >>> I then went back to my openmpi directories and tried running some of the >>> individual tests in the test and examples directories. In particular in >>> test/class I found one test that seem to not be run as part of make check >>> which failed, even with one processor; this is opal_bitmap. Not sure if >>> this is because 1.7.4rc1 is incomplete, or there is something wrong with >>> the installation, or maybe a 32 vs 64 bit thing? The error message is >>> >>> mpirun detected that one or more processes exited with non-zero status, >>> thus causing the job to be terminated. The first process to do so was: >>> >>> Process name: [[48805,1],0] >>> Exit code: 255 >>> >>> Any suggestions? >>> >>> More generally has anyone out there gotten an openmpi build on Mavericks >>> to work with sufficient success that they can get the attached >>> Sample_mpio.c (or better yet, parallel HDF5) to build? >>> >>> Details: Running Mac OS X 10.9.1 on a mid-2009 Macbook pro with 4 GB >>> memory; tried openmpi 1.6.5 and 1.7.4rc1. Built openmpi against the stock >>> gcc that comes with XCode 5.0.2, and gfortran 4.9.0. >>> >>> Files attached: config.log.gz, openmpialllog.gz (output of running >>> ompi_info --all), checklog2.gz (output of make.check in top openmpi >>> directory). >>> >>> I am not attaching logs of make and install since those seem to have >>> been successful, but can generate those if that would be helpful. >>> >>> _______________________________________________ >>> users mailing list >>> us...@open-mpi.org >>> http://www.open-mpi.org/mailman/listinfo.cgi/users >>> >> >> > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users >
