On Oct 24, 2012, at 7:58 PM, Yoshiki SATO <yosh...@ci.i.u-tokyo.ac.jp> wrote:

> Thanks for you comments.
> 
>>> If so, my question is if I need NOT to install JDK to the all nodes.  In 
>>> other words is it possible to have a machine used as a worker without JDK 
>>> installed?
>>> 
>> 
>> You do not need JDK installed on worker nodes - it only has to be on the 
>> node where you compile your code. However, we launch a JVM for each process, 
>> so you must at least have the JVM installed on each worker. This is 
>> typically included in a base Linux installation (just look for the "java" 
>> command, usually in /usr/bin), so you usually don't have to do anything 
>> special (as opposed to installing the JDK, which doesn't usually come in the 
>> base install)
> 
> Ok, but I meant to say about JVM, because my requirement is to leverage such 
> nodes as have no JVM supported, for example, Gentoo Linux/SPARC64 as workers. 
>  I thought that the Java binding implementation wraps Open MPI only on the 
> rank zero side.

No, every process executes in Java - your application code IS, after all, in 
Java. What we mean by the FAQ is that the processes access the underlying MPI 
operations via a JNI module that translates from Java to the native C 
implementation. So you must have JVM support on each machine.

>  This is because the FAQ says:
> 
>> 8. Do the Java bindings impact performance of my non-Java application?
>> The Java bindings in Open MPI are completely transparent to all other Open 
>> MPI users and have zero performance impact on the rest of the code/bindings.

That statement is intended to reassure all non-Java users that the Java 
bindings will in no way impact them.

> 
> 
> But I realize that this perhaps mentions about the Open MPI applications that 
> use a Java-enabled Open MPI build.  Meantime, the next FAQ is specifying the 
> possibility of performance penalties for Java applications that use Open MPI.

That is correct - as the statement says, *non-Java* applications will see no 
impact of having Java enabled in the build. Java-based applications see a 
performance penalty relative to a C-based application.

HTH
Ralph

> 
> Regards,
> --yoshiki
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