Pretty simple, really: #!/bin/sh mpiexec -np 64 binary_executable < input_filename > output_filename
is all you need. We'll pickup the allocation automatically and do all that is required On Sep 13, 2012, at 12:37 AM, bharati_si...@jncasr.ac.in wrote: > Hello Openmpi, > > I have Torque integrated with Moab cluster.We use msub command with intel mpi > . I submit parallel job by using below two scripts. > > $ cat submit1.sh > msub -V -N name_of_job -q normal64c -l nodes=8:ppn=8 -d directory_path > -e directory_path/err ./submit2 > > $ cat submit2.sh > #!/bin/sh > cat $PBS_NODEFILE |uniq > temp.1 > mpdboot -n `cat temp.1|wc -l` -f temp.1 -r ssh -v > mpiexec -genv I_MPI_DEVICE rdma -envall -np 64 binary_executable < > input_filename > output_filename > mpdallexit > > We have infiniband interconnection. I have compiled openmpi-1.6 with below > options > > $ ./configure --prefix=/home/bharati/software/openmpi CC=icc CXX=icpc > F77=mpif90 --with-tm=/usr/src/torque-2.4.8/src/ --with-openib=/usr > > May I know how can I do the same with openmpi? > > Thanks & Regards > Bharati Singh > > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users
