On Thu, 10 May 2012, Jim Maas wrote: > I'm getting the following error when running an open-mpi job on a > LSF cluster using a new version of R 2.15. I didn't get the error > message when running previously using R 2.13. Could anyone point me > to the possible cause, or how to find the offending code? I'm not a > sysop, just a user.
Presumably some call that R is making is invoking system() when it used to handle it internally. strace'ing the R process will tell you what call it is making, and from that you can track down the code that makes that call. Don Armstrong -- 6: I'm human. I have a thousand flaws. I break down. I get up or I don't get up. I get lost. I make the same mistakes over and over. I have scars and wounds. Sometimes when I can't bear them anymore, I drink. You can't fix me. You can't fix any of us. You can't make us perfect. -- "The Prisoner (2009 Miniseries)" _Checkmate_ http://www.donarmstrong.com http://rzlab.ucr.edu
