Yeah, you are missing all the component libraries - there should be a couple of subdirectories under there. I would suggest either reinstalling or grabbing a tarball and installing by hand.
On Dec 21, 2011, at 8:13 AM, Rushton Martin wrote: > I agree it looks like it, but YaST ought to be able to work out > dependencies. Anyhow, here is the listing: > > isis:/usr/lib64/mpi/gcc/openmpi # ls -R lib64 > lib64: > libmca_common_sm.so.1 libmpi_f77.so.0 libopen-rte.so.0 > libmca_common_sm.so.1.0.0 libmpi_f77.so.0.0.1 libopen-rte.so.0.0.0 > libmpi.so.0 libmpi_f90.so.0 libopenmpi_malloc.so.0 > libmpi.so.0.0.2 libmpi_f90.so.0.0.1 > libopenmpi_malloc.so.0.0.0 > libmpi_cxx.so.0 libopen-pal.so.0 mpi.mod > libmpi_cxx.so.0.0.1 libopen-pal.so.0.0.0 > isis:/usr/lib64/mpi/gcc/openmpi # > > Thanks all, > > Martin Rushton > HPC System Manager, Weapons Technologies > Tel: 01959 514777, Mobile: 07939 219057 > email: jmrush...@qinetiq.com > www.QinetiQ.com > QinetiQ - Delivering customer-focused solutions > > Please consider the environment before printing this email. > -----Original Message----- > From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On > Behalf Of Ralph Castain > Sent: 21 December 2011 15:03 > To: Open MPI Users > Subject: Re: [OMPI users] UC Clean install fails > > How strange - it looks like you are missing a bunch of libraries. What > do you get if you do > > ls -R /usr/lib64/mpi/gcc/openmpi/lib64 > > > On Dec 21, 2011, at 6:26 AM, Rushton Martin wrote: > >> For run-time problems: >> >> 1.Check the FAQ first. DONE. nothing > obvious. >> 2.The version of Open MPI that you're using. openmpi-1.4.3 >> 3.The config.log file Installed as binary >> 4.The output of the "ompi_info --all" See enclosed gzip >> 5.If running on more than one node Not applicable >> 6.A detailed description of what is failing. See original posting >> PATH >> /usr/lib64/mpi/gcc/openmpi/bin:\ >> ...:\ >> /usr/local/bin:\ >> /usr/bin:\ >> /bin:/usr/bin/X11:\ >> /usr/X11R6/bin:\ >> /usr/games:\ >> /usr/lib64/jvm/jre/bin >> LD_LIBRARY_PATH >> /usr/lib64/mpi/gcc/openmpi/lib64 >> 7.Network Not applicable >> >> I hope this is the correct information you require. >> >> Martin Rushton >> HPC System Manager, Weapons Technologies >> Tel: 01959 514777, Mobile: 07939 219057 >> email: jmrush...@qinetiq.com >> www.QinetiQ.com >> QinetiQ - Delivering customer-focused solutions >> >> Please consider the environment before printing this email. >> -----Original Message----- >> From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] >> On Behalf Of Jeff Squyres (jsquyres) >> Sent: 21 December 2011 12:51 >> To: Open MPI Users >> Cc: Open MPI Users >> Subject: Re: [OMPI users] Clean install fails >> >> Your OMPI install looks busted. Can you send all the info listed in >> the "support" section on the OMPI web site? >> >> Sent from my phone. No type good. >> >> On Dec 21, 2011, at 7:37 AM, "Rushton Martin" <jmrush...@qinetiq.com> >> wrote: >> >>> I've just completed installing OpenSuSE 12.1 on a standalone node. >>> Using the bundled GCC and OpenMPI the user code fails. I've reduced >>> the problem to that below, but without the source I'm not sure what >>> orte_init is after. Using mpirun -np 1 or -np 2 both fail in the >>> same >> >>> way. Any suggestions? >>> >>> $ cat test.f >>> END >>> $ gfortran -o test-f test.f >>> $ ./test-f >>> $ echo $? >>> 0 >>> $ mpirun ./test-f >>> [isis:02474] [[INVALID],INVALID] ORTE_ERROR_LOG: Not found in file >>> runtime/orte_init.c at line 125 >>> --------------------------------------------------------------------- >>> - >>> -- >>> -- >>> It looks like orte_init failed for some reason; your parallel process > >>> is likely to abort. There are many reasons that a parallel process >>> can fail during orte_init; some of which are due to configuration or >>> environment problems. This failure appears to be an internal >>> failure; >> >>> here's some additional information (which may only be relevant to an >>> Open MPI developer): >>> >>> orte_ess_base_select failed >>> --> Returned value Not found (-13) instead of ORTE_SUCCESS >>> --------------------------------------------------------------------- >>> - >>> -- >>> -- >>> [isis:02474] [[INVALID],INVALID] ORTE_ERROR_LOG: Not found in file >>> orterun.c at line 543 $ >>> >>> >>> Martin Rushton >>> HPC System Manager, Weapons Technologies >>> Tel: 01959 514777, Mobile: 07939 219057 >>> email: jmrush...@qinetiq.com >>> www.QinetiQ.com >>> QinetiQ - Delivering customer-focused solutions > This email and any attachments to it may be confidential and are > intended solely for the use of the individual to whom it is > addressed. If you are not the intended recipient of this email, > you must neither take any action based upon its contents, nor > copy or show it to anyone. Please contact the sender if you > believe you have received this email in error. QinetiQ may > monitor email traffic data and also the content of email for > the purposes of security. QinetiQ Limited (Registered in England > & Wales: Company Number: 3796233) Registered office: Cody Technology > Park, Ively Road, Farnborough, Hampshire, GU14 0LX http://www.qinetiq.com. > > _______________________________________________ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users
