Hello,
I have the following error when I run a job:
It seems that there is no lamd running on the host cbuach.
This indicates that the LAM/MPI runtime environment is not operating.
The LAM/MPI runtime environment is necessary for MPI programs to run
(the MPI program tired to invoke the "MPI_Init" function).
Please run the "lamboot" command the start the LAM/MPI runtime
environment. See the LAM/MPI documentation for how to invoke
"lamboot" across multiple machines.
I added the environment variables in my .bashrc:
PATH=/usr/local/openmpi-1.3.2/bin:$PATH
export PATH
LD_LIBRARY_PATH=/usr/local/openmpi-1.3.2/lib:$LD_LIBRARY_PATH
export LD_LIBRARY_PATH
I tried defining directly the path of the mpirun on the open-mpi folder:
/usr/local/openmpi-1.3.2/bin/mpirun --host ubuntu-frontend -np 8 mb -i
batch_flavescens.txt>log.txt &
but doesn't work, I hope any help to fix this problem.
this is the ompi_info output:
Package: Open MPI cbuach@cbuach Distribution
Open MPI: 1.3.2
Open MPI SVN revision: r21054
Open MPI release date: Apr 21, 2009
Open RTE: 1.3.2
Open RTE SVN revision: r21054
Open RTE release date: Apr 21, 2009
OPAL: 1.3.2
OPAL SVN revision: r21054
OPAL release date: Apr 21, 2009
Ident string: 1.3.2
Prefix: /usr/local/openmpi-1.3.2
Configured architecture: x86_64-unknown-linux-gnu
Configure host: cbuach
Configured by: cbuach
Configured on: Mon May 25 16:08:22 CLT 2009
Configure host: cbuach
Built by: cbuach
Built on: lun may 25 16:15:45 CLT 2009
Built host: cbuach
C bindings: yes
C++ bindings: yes
Fortran77 bindings: no
Fortran90 bindings: no
Fortran90 bindings size: na
C compiler: gcc
C compiler absolute: /usr/bin/gcc
C++ compiler: g++
C++ compiler absolute: /usr/bin/g++
Fortran77 compiler: none
Fortran77 compiler abs: none
Fortran90 compiler: none
Fortran90 compiler abs: none
C profiling: yes
C++ profiling: yes
Fortran77 profiling: no
Fortran90 profiling: no
C++ exceptions: no
Thread support: posix (mpi: no, progress: no)
Sparse Groups: no
Internal debug support: no
MPI parameter check: runtime
Memory profiling support: no
Memory debugging support: no
libltdl support: yes
Heterogeneous support: no
mpirun default --prefix: no
MPI I/O support: yes
MPI_WTIME support: gettimeofday
Symbol visibility support: yes
FT Checkpoint support: no (checkpoint thread: no)
MCA backtrace: execinfo (MCA v2.0, API v2.0, Component v1.3.2)
MCA memory: ptmalloc2 (MCA v2.0, API v2.0, Component v1.3.2)
MCA paffinity: linux (MCA v2.0, API v2.0, Component v1.3.2)
MCA carto: auto_detect (MCA v2.0, API v2.0, Component v1.3.2)
MCA carto: file (MCA v2.0, API v2.0, Component v1.3.2)
MCA maffinity: first_use (MCA v2.0, API v2.0, Component v1.3.2)
MCA timer: linux (MCA v2.0, API v2.0, Component v1.3.2)
MCA installdirs: env (MCA v2.0, API v2.0, Component v1.3.2)
MCA installdirs: config (MCA v2.0, API v2.0, Component v1.3.2)
MCA dpm: orte (MCA v2.0, API v2.0, Component v1.3.2)
MCA pubsub: orte (MCA v2.0, API v2.0, Component v1.3.2)
MCA allocator: basic (MCA v2.0, API v2.0, Component v1.3.2)
MCA allocator: bucket (MCA v2.0, API v2.0, Component v1.3.2)
MCA coll: basic (MCA v2.0, API v2.0, Component v1.3.2)
MCA coll: hierarch (MCA v2.0, API v2.0, Component v1.3.2)
MCA coll: inter (MCA v2.0, API v2.0, Component v1.3.2)
MCA coll: self (MCA v2.0, API v2.0, Component v1.3.2)
MCA coll: sm (MCA v2.0, API v2.0, Component v1.3.2)
MCA coll: sync (MCA v2.0, API v2.0, Component v1.3.2)
MCA coll: tuned (MCA v2.0, API v2.0, Component v1.3.2)
MCA io: romio (MCA v2.0, API v2.0, Component v1.3.2)
MCA mpool: fake (MCA v2.0, API v2.0, Component v1.3.2)
MCA mpool: rdma (MCA v2.0, API v2.0, Component v1.3.2)
MCA mpool: sm (MCA v2.0, API v2.0, Component v1.3.2)
MCA pml: cm (MCA v2.0, API v2.0, Component v1.3.2)
MCA pml: csum (MCA v2.0, API v2.0, Component v1.3.2)
MCA pml: ob1 (MCA v2.0, API v2.0, Component v1.3.2)
MCA pml: v (MCA v2.0, API v2.0, Component v1.3.2)
MCA bml: r2 (MCA v2.0, API v2.0, Component v1.3.2)
MCA rcache: vma (MCA v2.0, API v2.0, Component v1.3.2)
MCA btl: self (MCA v2.0, API v2.0, Component v1.3.2)
MCA btl: sm (MCA v2.0, API v2.0, Component v1.3.2)
MCA btl: tcp (MCA v2.0, API v2.0, Component v1.3.2)
MCA topo: unity (MCA v2.0, API v2.0, Component v1.3.2)
MCA osc: pt2pt (MCA v2.0, API v2.0, Component v1.3.2)
MCA osc: rdma (MCA v2.0, API v2.0, Component v1.3.2)
MCA iof: hnp (MCA v2.0, API v2.0, Component v1.3.2)
MCA iof: orted (MCA v2.0, API v2.0, Component v1.3.2)
MCA iof: tool (MCA v2.0, API v2.0, Component v1.3.2)
MCA oob: tcp (MCA v2.0, API v2.0, Component v1.3.2)
MCA odls: default (MCA v2.0, API v2.0, Component v1.3.2)
MCA ras: slurm (MCA v2.0, API v2.0, Component v1.3.2)
MCA rmaps: rank_file (MCA v2.0, API v2.0, Component v1.3.2)
MCA rmaps: round_robin (MCA v2.0, API v2.0, Component v1.3.2)
MCA rmaps: seq (MCA v2.0, API v2.0, Component v1.3.2)
MCA rml: oob (MCA v2.0, API v2.0, Component v1.3.2)
MCA routed: binomial (MCA v2.0, API v2.0, Component v1.3.2)
MCA routed: direct (MCA v2.0, API v2.0, Component v1.3.2)
MCA routed: linear (MCA v2.0, API v2.0, Component v1.3.2)
MCA plm: rsh (MCA v2.0, API v2.0, Component v1.3.2)
MCA plm: slurm (MCA v2.0, API v2.0, Component v1.3.2)
MCA filem: rsh (MCA v2.0, API v2.0, Component v1.3.2)
MCA errmgr: default (MCA v2.0, API v2.0, Component v1.3.2)
MCA ess: env (MCA v2.0, API v2.0, Component v1.3.2)
MCA ess: hnp (MCA v2.0, API v2.0, Component v1.3.2)
MCA ess: singleton (MCA v2.0, API v2.0, Component v1.3.2)
MCA ess: slurm (MCA v2.0, API v2.0, Component v1.3.2)
MCA ess: tool (MCA v2.0, API v2.0, Component v1.3.2)
MCA grpcomm: bad (MCA v2.0, API v2.0, Component v1.3.2)
MCA grpcomm: basic (MCA v2.0, API v2.0, Component v1.3.2)
Thanks
-
Dímar González S.
Estudiante Ingienería Civil en Informática
Universidad Austral de Chile
