Am 29.09.2008 um 18:27 schrieb Zhiliang Hu:

How you run that command line from *inside a Torque* job?

-- I am only a poor biologist, reading through the manuals/ tutorials but still don't have good clues... (thanks in advance ;-)

What is the content of your jobscript? Did you request more than one node for your job?

-- Reuti


Zhiliang


At 11:48 AM 9/29/2008 -0400, you wrote:
We need to see that command line from *inside a Torque* job.  That's
the only place where those PBS_* environment variables will exists --
OMPI's mpirun should be seeing these environment variables (when
inside a Torque job) and then reacting to them by using the Torque
native launcher, etc.

Just to be sure: you are launching OMPI's "mpirun" inside your Torque
job, correct?

As shown in my original post, I tried to (1) send a mpirun job without torque that it works; (2) submit it with 'qsub' but end up with things on one node.


On Sep 29, 2008, at 11:41 AM, Zhiliang Hu wrote:

At 11:29 AM 9/29/2008 -0400, Jeff Squyres wrote:
On Sep 28, 2008, at 10:07 PM, Zhiliang Hu wrote:

Indeed as you expected, "printenv | grep PBS" produced nothing.

Are you *sure*? I find it very hard to believe that if you run that
command ***in a Torque job*** that you will get no output.  Torque
would have to be *seriously* misbehaving for that to occur.

--
Jeff Squyres
Cisco Systems

That's a command line without a torque job.

Zhiliang

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