Did you setup your environment (particularly LD_LIBRARY_PATH):
http://www.open-mpi.org/faq/?category=running#run-prereqs
http://www.open-mpi.org/faq/?category=running#adding-ompi-to-path
http://www.open-mpi.org/faq/?category=running#mpirun-prefix
On May 16, 2008, at 12:35 PM, Wen Hao Wang wrote:
Thanks for the info. But even with the all the default arguments, "./
configure" of lamtests failed with similar error.
[root@xblade08 lamtests-7.1.4]# ./configure
Configuring LAM test suite version 7.1.4
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking build system type... i686-pc-linux-gnu
checking host system type... i686-pc-linux-gnu
checking for mpicc... yes
checking for gcc... mpicc
checking for C compiler default output file name... a.out
checking whether the C compiler works... configure: error: cannot
run C compiled programs.
If you meant to cross compile, use `--host'.
See `config.log' for more details.
[root@xblade08 lamtests-7.1.4]# grep cannot config.log
./a.out: error while loading shared libraries: libopen-rte.so.0:
cannot open shared object file: No such file or directory
configure:2388: error: cannot run C compiled programs.
I am attaching the config.log of lamtests this time.
(See attached file: config.log.lamtest.default)
Wen Hao Wang
<graycol.gif>Jeff Squyres <jsquy...@cisco.com>
Jeff Squyres <jsquy...@cisco.com>
Sent by: users-boun...@open-mpi.org
2008-05-16 23:51
Please respond to
Open MPI Users <us...@open-mpi.org>
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Re: [OMPI users] Compiler Choice in openmpi
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Ah, this is a simple problem. Don't override the CC/etc. for the
lamtests suite; it should default to mpicc and friends. If you
override the CC for the lamtests configure, it'll use those compilers
directly (not mpicc and friends).
Make sense?
On May 16, 2008, at 11:44 AM, Wen Hao Wang wrote:
> Here are the details of my env. My machine has only one ethernet
> network adapter. If anything is missed, please let me know.
>
>
> [root@xblade08 wwh]# uname -a
> Linux xblade08.clusters.com 2.6.18-87.el5 #1 SMP Tue Mar 25 17:28:02
> EDT 2008 i686 i686 i386 GNU/Linux
> [root@xblade08 wwh]# cat /etc/*release
> Red Hat Enterprise Linux Server release 5.2 Beta (Tikanga)
> [root@xblade08 wwh]# echo $PATH
> /opt/intel/fc/10.1.015/bin:/opt/intel/cc/10.1.015/bin:/usr/kerberos/
> sbin:/usr/kerberos/bin:/usr/local/sbin:/usr/local/bin:/sbin:/bin:/
> usr/sbin:/usr/bin:/opt/bin:/opt/xcat/bin:/opt/xcat/sbin:/opt/intel/
> cc/10.1.015/bin:/opt/intel/fc/10.1.015/bin:/root/bin
> [root@xblade08 wwh]# echo $LD_LIBRARY_PATH
> /opt/intel/fc/10.1.015/lib:/opt/intel/cc/10.1.015/lib
> [root@xblade08 wwh]# rpm -qa|grep intel
> intel-ifort101015-10.1.015-1
> intel-isubh101015-10.1.015-1
> intel-iidb101015-10.1.015-1
> intel-icc101015-10.1.015-1
> [root@xblade08 wwh]# ifconfig
> eth0 Link encap:Ethernet HWaddr 00:0D:60:9C:09:CA
> inet addr:172.20.3.24 Bcast:172.20.255.255 Mask:255.255.0.0
> inet6 addr: fe80::20d:60ff:fe9c:9ca/64 Scope:Link
> UP BROADCAST RUNNING MULTICAST MTU:1500 Metric:1
> RX packets:1030390 errors:0 dropped:0 overruns:0 frame:0
> TX packets:422275 errors:0 dropped:0 overruns:0 carrier:0
> collisions:0 txqueuelen:1000
> RX bytes:78898265 (75.2 MiB) TX bytes:155746699 (148.5 MiB)
> Interrupt:169
>
> lo Link encap:Local Loopback
> inet addr:127.0.0.1 Mask:255.0.0.0
> inet6 addr: ::1/128 Scope:Host
> UP LOOPBACK RUNNING MTU:16436 Metric:1
> RX packets:2154 errors:0 dropped:0 overruns:0 frame:0
> TX packets:2154 errors:0 dropped:0 overruns:0 carrier:0
> collisions:0 txqueuelen:0
> RX bytes:177404 (173.2 KiB) TX bytes:177404 (173.2 KiB)
>
> I run "./configure CC=icc CXX=icpc FC=ifort F77=ifort" and "make all
> install" to install open mpi. The config.log can be got in the
> attched tarball. After these two command, mpic* commands seem to
work.
> [root@xblade08 wwh]# mpicc --showme
> icc -I/usr/local/include -pthread -L/usr/local/lib -lmpi -lopen-
rte -
> lopen-pal -ldl -Wl,--export-dynamic -lnsl -lutil
> [root@xblade08 wwh]# mpif77 --showme
> ifort -I/usr/local/include -pthread -L/usr/local/lib -lmpi_f77 -lmpi
> -lopen-rte -lopen-pal -ldl -Wl,--export-dynamic -lnsl -lutil
>
> Then I used open mpi to compile lamtests 7.1.4, downloaded from
http://www.lam-mpi.org/7.1/test-suite.php
> . "./configure CC=icc CXX=icpc FC=ifort F77=ifort" failed with
> following message:
> [root@xblade08 lamtests-7.1.4]# ./configure CC=icc CXX=icpc FC=ifort
> F77=ifort
> Configuring LAM test suite version 7.1.4
> checking for a BSD-compatible install... /usr/bin/install -c
> checking whether build environment is sane... yes
> checking for gawk... gawk
> checking whether make sets $(MAKE)... yes
> checking build system type... i686-pc-linux-gnu
> checking host system type... i686-pc-linux-gnu
> checking for mpicc... yes
> checking for gcc... mpicc
> checking for C compiler default output file name... a.out
> checking whether the C compiler works... configure: error: cannot
> run C compiled programs.
> If you meant to cross compile, use `--host'.
> See `config.log' for more details.
> [root@xblade08 lamtests-7.1.4]# grep cannot config.log
> ./a.out: error while loading shared libraries: libopen-rte.so.0:
> cannot open shared object file: No such file or directory
> configure:2388: error: cannot run C compiled programs.
> [root@xblade08 lamtests-7.1.4]# file /usr/local/lib/libopen-rte.so.0
> /usr/local/lib/libopen-rte.so.0: symbolic link to `libopen-rte.so.
> 0.0.0'
>
> (See attached file: mpilibs.tar.gz)
>
> Wen Hao Wang
>
> <graycol.gif>Jeff Squyres <jsquy...@cisco.com>
>
>
> Jeff Squyres <jsquy...@cisco.com>
> Sent by: users-boun...@open-mpi.org
> 2008-05-16 22:35
> Please respond to
> Open MPI Users <us...@open-mpi.org>
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> Subject
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> Re: [OMPI users] Compiler Choice in openmpi
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>
> On May 15, 2008, at 12:58 PM, Wen Hao Wang wrote:
>
> > After I run "./configure CC=icc CXX=icpc FC=ifort F77=ifort" and
> > "make all install", some libs are installed to /usr/local/lib.
These
> > libs can not be found when compiling my program, how should I do?
> >
>
> Can you send all the information listed here:
>
> http://www.open-mpi.org/community/help/
>
> And also the output you're seeing when your application fails to
> compile.
>
> Thanks!
>
> --
> Jeff Squyres
> Cisco Systems
>
> _______________________________________________
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